DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glt and ace-4

DIOPT Version :9

Sequence 1:NP_001245946.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster
Sequence 2:NP_496962.1 Gene:ace-4 / 175074 WormBaseID:WBGene00000038 Length:602 Species:Caenorhabditis elegans


Alignment Length:568 Identity:146/568 - (25%)
Similarity:226/568 - (39%) Gaps:128/568 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 QPQEAVVQAPEVGQILGISGHKTIANRPVNAFLGIRYGTVGGGLARF-QAAQPIGYQGRVNATVQ 119
            |....||...::|.|.|....  ..::.:..|.|:.:........|| :..:...::|..:||  
 Worm    22 QAVHPVVLETKLGDIKGTEFF--FLSKKIRTFFGVPFAEPAVEDFRFRKPREKKQWRGLYDAT-- 82

  Fly   120 SPNCAQFPELDRLRL----SESRGENV---DDCLTLDIYAPEGANQLPVLVFVHGEMLFDGGSEE 177
            .|..|.|...|....    ||....|.   :|||.|:|:||..|..|.|:|:     .|.||...
 Worm    83 KPANACFQTRDNYNTSFWGSEMWNANTQISEDCLYLNIWAPADAYNLTVMVW-----FFGGGFYS 142

  Fly   178 AQPDYVL--------EKDVLLVSINYRLAPFGFLSALTDELPGNVALSDLQLALEWLQRNVVHFG 234
            ..|...:        .::|::|:|||||.|||||.....:.|||:.|.|.||||.|:::|:|.||
 Worm   143 GSPSLSIYDGKALTSTQNVIVVNINYRLGPFGFLYLGHPDAPGNMGLLDQQLALHWVRQNIVSFG 207

  Fly   235 GNAGQVTLVGQAGGAT--LAHALSLSGRAGNLFQQLILQSGTALNPYLIDNQPL---DTLSTFAR 294
            ||..:|.:.||:.||.  :||.::...|  .||:..|||||:..|.:.| |.|.   ........
 Worm   208 GNPDKVAVFGQSAGAASIVAHLIAPGSR--GLFKNAILQSGSLENTWAI-NSPFRAKQKSEKLLE 269

  Fly   295 LARCPPPSINPSAQGLKPLYDCLARLPTSQLVAAFEQLLLQNEHLGLTQLG-GFKLVVGDP--LG 356
            |..|...:::.|..       ||      :||:. |||.|...::.||.|. .|.:|..|.  .|
 Worm   270 LVGCNKTTVDTSMA-------CL------RLVSP-EQLSLSTWNISLTYLEFPFVIVSRDKHFFG 320

  Fly   357 FLPSHPASLATNSSLALPMIIGATKDASAFIVSRIYDQLARLQSRNVSDYIDVVLRHTAPPSEHR 421
            .|.:|.|....:.:..:.::||..||...:  ..||         .:..:.|     .|.|.|..
 Worm   321 HLDAHAALREGDFNRDVNLMIGMNKDEGNY--WNIY---------QLPQFFD-----KADPPELN 369

  Fly   422 LWKQWALREIFTPIQEQTASLQTVAPGLLELSNYILYRAP--------------VINSI------ 466
                   |..|..:.::|.|:|   |.::..:...:|..|              .:|.|      
 Worm   370 -------RTEFDFLIDRTFSIQ---PDIIRSAAKYIYSDPNCTDHGRKTRFYAGQMNQIVGDYFF 424

  Fly   467 -------SQSYRSVP-------------AYLYTFDYRGEHHRFGHLSNPLPFGVDASLSDDSVYL 511
                   :..:||:|             .::|.|.....       :||.|....|....:..|:
 Worm   425 SCDSLWLADQFRSIPRVKSSSPQRKPGKVFVYHFTQSSS-------ANPWPKWTGAMHGYEIEYV 482

  Fly   512 FPYPPEASR-LNPLDRSLSRALVTMWVNFATTGVPN----PSSGVWPQ 554
            |..|...|: ....::..||.::..|.:||..|.|.    .:|..||:
 Worm   483 FGIPLSYSKNYKRREQIFSRKIMQFWASFAKNGTPKLRVLKNSEHWPE 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GltNP_001245946.1 COesterase 55..579 CDD:278561 146/568 (26%)
Aes <146..345 CDD:223730 73/211 (35%)
RILP-like <677..>717 CDD:304877
ace-4NP_496962.1 COesterase 28..562 CDD:278561 144/562 (26%)
Aes <120..>243 CDD:223730 49/129 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156978
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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