DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glt and cest-27

DIOPT Version :9

Sequence 1:NP_001245946.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster
Sequence 2:NP_871861.2 Gene:cest-27 / 171610 WormBaseID:WBGene00018958 Length:561 Species:Caenorhabditis elegans


Alignment Length:560 Identity:135/560 - (24%)
Similarity:217/560 - (38%) Gaps:111/560 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 GQILGISGHKTIANRPVNAFLGIRYGTVGGGLARFQAAQPIGYQGRVNATVQSPNCAQF----PE 128
            |.|.|: |::......|..||||.|.....|..||:  :|:.::    ...:..:|.:|    |:
 Worm    33 GPIKGV-GYEQEDGSVVEGFLGIPYAEPPIGALRFK--KPVAHR----KWTEPLDCVRFGPRSPQ 90

  Fly   129 LDRL--RLSESRGENVDDCLTLDIYAP-----EGANQLPVLVFVHGEMLFDGGSEEAQPDY---- 182
            .|.|  :...:.|::.:.||:|:::.|     |..:..||:||:||    .|.:..:..:|    
 Worm    91 NDELLGQFVNTVGKSEEHCLSLNVFTPKWESNEWPDGFPVMVFIHG----GGFAVHSSSNYGCAS 151

  Fly   183 ----VLEKDVLLVSINYRLAPFGFLSALTDELPGNVALSDLQLALEWLQRNVVHFGGNAGQVTLV 243
                :..|||::|:|||||...||.:...:...||:.|.|...||||:|.|:..|.|:...||:.
 Worm   152 IARNLCTKDVVVVTINYRLGVLGFFTTGDEVCRGNLGLWDQTAALEWVQENIQSFRGDPDNVTIF 216

  Fly   244 GQAGGATLAHALSLSGRAGNLFQQLILQSGTALNPYLI--DNQPLDTLSTFARLARCPPPSINPS 306
            ||:.|......|.||..:..||.:.|..:|.....:.:  ..|.......|||........ |.|
 Worm   217 GQSAGGASVDLLCLSPHSRGLFNRAIPMAGNGECDFAMRTSEQQAQLSREFARYLGWEGDD-NDS 280

  Fly   307 AQGLKPLYDCLARLPTSQLVAAFEQLLLQNEHLGLTQLGGFKLVVGDPLGFLPS-------HPAS 364
                            ..|:...:|..|....:|:....|||......|.|:|:       .|.:
 Worm   281 ----------------EDLLQFIDQQPLYKIEMGINPKRGFKHSQAGSLYFVPNFDGDFFPKPLN 329

  Fly   365 LATNSSLALPMIIGATKDASAFIV-----SRIYDQLARLQSR--NVSDY---IDVVLRHT----- 414
            .....:..:.::.|.||....|.:     |:..:.:.:...|  ...||   .|.||:..     
 Worm   330 QLRKEAPKMQIMTGTTKYEGLFFIALGALSKNPEGIKKFMGRIFKECDYGERADDVLQMVYDFYF 394

  Fly   415 --APPSEHRLWKQWALREIFTPIQEQTASLQTVAPGLLELSNYILYR-APVINSISQSYRSVPAY 476
              ..|.:|    :..:.:|...|.:.:.             ||..|| |.::..:...     .|
 Worm   395 KGVHPKDH----EKNMHQIVKFIGDYSI-------------NYGTYRLANIMTDLQHD-----VY 437

  Fly   477 LYTFDYRGEHHR--FGHLSNPLPFGVDASLSDDSVYLFPYPPEASRLNPLDRSLSRALVTMWVNF 539
            .|.|||   |:.  ||.....|||......::....|........|.|..|:.:...:.|.:.||
 Worm   438 FYQFDY---HNSAGFGVFRWLLPFLGSTHCTEMRYVLGKGIISKFRPNDNDKKMLHVMTTYFTNF 499

  Fly   540 ATTGVP---NPSSGVWPQATSEYGPFLRFTNNQQSPLELD 576
            |..|.|   |..:|.|.:..|.: ||..|      .::||
 Worm   500 AKYGNPNGENQETGEWQKHDSAH-PFRHF------KIDLD 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GltNP_001245946.1 COesterase 55..579 CDD:278561 135/560 (24%)
Aes <146..345 CDD:223730 57/213 (27%)
RILP-like <677..>717 CDD:304877
cest-27NP_871861.2 COesterase 29..541 CDD:278561 135/560 (24%)
Aes <114..>283 CDD:223730 51/189 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157297
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D206516at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.850

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