DRSC/TRiP Functional Genomics Resources

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Protein Alignment Glt and Nlgn3

DIOPT Version :10

Sequence 1:NP_477504.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster
Sequence 2:NP_599163.2 Gene:Nlgn3 / 171297 RGDID:621119 Length:848 Species:Rattus norvegicus


Alignment Length:798 Identity:185/798 - (23%)
Similarity:283/798 - (35%) Gaps:253/798 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 PVPWQSETRYAQPQEAVVQAPEVGQILGISGHKTIANRPVNAFLGIRYGTVGGGLARFQAAQ-PI 108
            |.| ...|.:.:.:.|.|..|  .:|||          ||:.:||:.|.....|..||...: |.
  Rat    40 PAP-TVNTHFGKLRGARVPLP--SEILG----------PVDQYLGVPYAAPPIGEKRFLPPEPPP 91

  Fly   109 GYQGRVNATVQSPNCAQ-----FPELDRLRLSESRGENVD-----------DCLTLDIYAP---- 153
            .:.|..|||...|.|.|     .||   :.|......|:|           |||.|::|.|    
  Rat    92 SWSGIRNATHFPPVCPQNIHTAVPE---VMLPVWFTANLDIVATYIQEPNEDCLYLNVYVPTEDV 153

  Fly   154 --------------------EGANQ---------------------LPVLVFVHGEMLFDG---- 173
                                .||.:                     .||:|::||....:|    
  Rat   154 KRISKECARKPNKKICRKGGSGAKKQGEDLADNDGDEDEDIRDSGAKPVMVYIHGGSYMEGTGNM 218

  Fly   174 --GSEEAQPDYVLEK--DVLLVSINYRLAPFGFLSALTDELPGNVALSDLQLALEWLQRNVVHFG 234
              ||       ||..  :|:::::|||:...||||.......||..|.|...||.|:..|:..||
  Rat   219 IDGS-------VLASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLLDQIQALRWVSENIAFFG 276

  Fly   235 GNAGQVTLVGQAGGATLAHALSLSGRAGNLFQQLILQSGTALNPYLIDNQPLDTLSTFARLARCP 299
            |:..::|:.|...||:....|:||..:..|||:.|:|||:||:.:.::.||:...|..|....| 
  Rat   277 GDPRRITVFGSGIGASCVSLLTLSHHSEGLFQRAIIQSGSALSSWAVNYQPVKYTSLLADKVGC- 340

  Fly   300 PPSINPSAQGLKPLYDCLARLPTSQLVAAFEQLLLQNEHLGLTQLGGFKLVVGDP-----LGFLP 359
                  :......:.|||.:....:||.  :.:.....|:....:....::..||     .|...
  Rat   341 ------NVLDTVDMVDCLRQKSAKELVE--QDIQPARYHVAFGPVIDGDVIPDDPEILMEQGEFL 397

  Fly   360 SHPASLATNSSLALPMIIGATKDASAFIVSRIYDQLARLQSRNVSDYIDVV---------LRHTA 415
            ::...|..|....|..:.|.. |....:....:|.       :||:::|.:         ||.|.
  Rat   398 NYDIMLGVNQGEGLKFVEGVV-DPEDGVSGTDFDY-------SVSNFVDNLYGYPEGKDTLRETI 454

  Fly   416 PPSEHRLWKQWALRE-----------IFTPIQEQTASLQTVAPGLLELSNYILYRAPVINSISQS 469
                ..::..||.|:           :||       ..|.|.|.::....:..|.:         
  Rat   455 ----KFMYTDWADRDNPETRRKTLVALFT-------DHQWVEPSVVTADLHARYGS--------- 499

  Fly   470 YRSVPAYLYTFDYRGEHHRFGHLSNPLPFGVDASLSDDSVYLFPYPPEASRLNPLDR-------- 526
                |.|.|.|     :|....|..|.  ..||:..|:..|:|..|    .:.|.|.        
  Rat   500 ----PTYFYAF-----YHHCQSLMKPA--WSDAAHGDEVPYVFGVP----MVGPTDLFPCNFSKN 549

  Fly   527 --SLSRALVTMWVNFATTGVPNPSSGVWPQAT---------------SEYGP----FL------R 564
              .||..::|.|.|||.||.||...   ||.|               |:|.|    :|      |
  Rat   550 DVMLSAVVMTYWTNFAKTGDPNKPV---PQDTKFIHTKANRFEEVAWSKYNPRDQLYLHIGLKPR 611

  Fly   565 FTNNQQSP-----LELDPHFGEGIYLPNYRVIYKPTTNFSPPITTTTTTTTT------TTTTSRP 618
            ..::.::.     ..|.||    :|..:....|..||...||..||.::..|      |.:|.||
  Rat   612 VRDHYRATKVAFWKHLVPH----LYNLHDMFHYTSTTTKVPPPDTTHSSHITRRPNGKTWSTKRP 672

  Fly   619 YAYNPYANWQNRPSQQHPNWH---PADPEYVRAQEARQQEF--------------------IRER 660
            .....|:| :|.|.    :|:   .|.|..|........|.                    :..|
  Rat   673 AISPAYSN-ENAPG----SWNGDQDAGPLLVENPRDYSTELSVTIAVGASLLFLNVLAFAALYYR 732

  Fly   661 EQRRREQQLRDQQRYPQQ 678
            :.:||::.||  |..||:
  Rat   733 KDKRRQEPLR--QPSPQR 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GltNP_477504.1 COesterase 58..579 CDD:395084 151/655 (23%)
Casc1_N 681..>717 CDD:464947
Nlgn3NP_599163.2 COesterase 40..624 CDD:395084 152/661 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..195 2/25 (8%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 645..691 14/50 (28%)
Blue background indicates that the domain is not in the aligned region.

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