DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glt and clt

DIOPT Version :9

Sequence 1:NP_001245946.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster
Sequence 2:NP_536784.1 Gene:clt / 117300 FlyBaseID:FBgn0000326 Length:562 Species:Drosophila melanogaster


Alignment Length:598 Identity:163/598 - (27%)
Similarity:252/598 - (42%) Gaps:153/598 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 TRYAQPQEAVVQAPEVGQILGISGHKTIANRPVNAFLGIRYGTVGGGLARFQAAQPIGYQGRVNA 116
            ||:....:..|...: |.::| ...|.:.....|:|||:.|.....|..||::.:|         
  Fly    12 TRFCSSMKVKVPVKQ-GVLVG-RQKKLVNGLEYNSFLGVPYAEPPVGELRFRSPRP--------- 65

  Fly   117 TVQSPNCAQFPELDRLRLSE---SRGENV--------------DDCLTLDIYAPE---GANQLPV 161
                        |:|.:..|   |:..||              :|||.|::|||:   ....|||
  Fly    66 ------------LERFQKQELDCSKEGNVSYQRDPFTLEVAGSEDCLFLNVYAPKVKSTRTPLPV 118

  Fly   162 LVFVHGEMLF--DGGSEEAQPDYVLEKDVLLVSINYRLAPFGFLSALTDELPGNVALSDLQLALE 224
            :|::||...|  :|.|:...|..::|::|::|::||||...||||...:.:.||:.|.|.:||||
  Fly   119 MVWIHGGGFFFGNGNSDFHFPAKLMEQEVIVVTLNYRLGALGFLSLPEEGIHGNMGLKDQRLALE 183

  Fly   225 WLQRNVVHFGGNAGQVTLVGQAGGATLAHALSLSGRAGNLFQQLILQSGTALNPYLIDNQ-PLDT 288
            |:|.|:..|.|:...|||.|::.|.:..|..:.:..|..||.:.|:|||||...::..|: |..|
  Fly   184 WVQENIASFNGDPNNVTLFGESAGGSSVHLHTFARHAKRLFHKAIMQSGTANMEWVFQNEAPAKT 248

  Fly   289 ------------------LSTFARLARCPPPSINPSAQGLKPLYDCLARLPTSQLVAAFEQLLLQ 335
                              |.||.:..:..|.:|             ||.  |.::::..|    :
  Fly   249 RRLAELLGGGDFGGDSKALLTFLQSEKATPTAI-------------LAN--TLKVLSPDE----R 294

  Fly   336 NEHLGLTQLGGFKLVVGD---PLGFLP--------------SHPASLATNSSLALPMIIGATKDA 383
            ..||..    .||.||.|   |..||.              |.|..:..||:..|.:::.|.:..
  Fly   295 RRHLPF----AFKPVVEDSSSPDRFLEQDIMELMHKKDCLGSMPVIMGYNSAEGLAIVVKAKQKL 355

  Fly   384 SAFIVSRIYDQLARLQSRNVSDYIDVVLRHTAPPSEHRLWKQWALREIFTPIQEQTASLQTVAPG 448
            .|:     .|.||||..||      :||...||.::.....   :|..|  ...|..|.:.: ..
  Fly   356 EAY-----EDDLARLVPRN------LVLDPQAPEAQEAASD---IRAFF--FNGQALSKENM-DN 403

  Fly   449 LLEL-SNY----ILYRAPVINSISQSYRSVPAYLYTFDYRGEHHRFGHL-SNPLPFGVDASLSDD 507
            |::| |:|    .|.||..|::..|:  ..|.|.|..||.|..:.:..: .|....||  :.:||
  Fly   404 LVDLFSDYHFSMDLQRAVEIHASCQT--QSPLYFYRLDYVGGRNLYKKIFQNEDLRGV--AHADD 464

  Fly   508 SVYLFPYPPEASRLNPLDRSLSRALVTMWVNFATTGVPNPSSGVWPQATSEYGPFLRFTNNQQSP 572
            ..|||....:.:.:|..|..::..|..||.|||..|.|:|   :|                  .|
  Fly   465 ICYLFQMAGDETEMNRDDLMVTERLCEMWANFARDGKPSP---IW------------------KP 508

  Fly   573 LELDPHFGEGIYL 585
            :: .||.||.|.|
  Fly   509 VK-KPHNGEPIQL 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GltNP_001245946.1 COesterase 55..579 CDD:278561 156/587 (27%)
Aes <146..345 CDD:223730 68/222 (31%)
RILP-like <677..>717 CDD:304877
cltNP_536784.1 COesterase 22..543 CDD:278561 161/588 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D206516at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

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