DRSC/TRiP Functional Genomics Resources

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Protein Alignment Glt and Nlgn1

DIOPT Version :9

Sequence 1:NP_001245946.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster
Sequence 2:XP_038957495.1 Gene:Nlgn1 / 116647 RGDID:621117 Length:863 Species:Rattus norvegicus


Alignment Length:704 Identity:178/704 - (25%)
Similarity:263/704 - (37%) Gaps:199/704 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 GQILGISGHKTIANR---PVNAFLGIRYGTVGGGLARFQAAQPIGYQGRV-NATVQSPNCAQ--- 125
            |:|.||.  |.:.|.   ||..|||:.|.....|..|||..:|......: |||..:|.|.|   
  Rat    60 GKIRGIK--KELNNEILGPVIQFLGVPYAAPPTGEHRFQPPEPPSPWSDIRNATQFAPVCPQNII 122

  Fly   126 ---FPE----------LDRLRLSESRGENVDDCLTLDIYAP------------------------ 153
               .||          ||  .:|....:..:|||.|:||.|                        
  Rat   123 DGRLPEVMLPVWFTNNLD--VVSSYVQDQSEDCLYLNIYVPTEDVKRISKECARKPGKKICRKGG 185

  Fly   154 ----------------------EGANQLPVLVFVHGEM-------LFDGGSEEAQPDYVLEK--D 187
                                  :.....||:|::||..       |:||.        ||..  :
  Rat   186 PLTKTQTDDLGDNDRAEDEDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGS--------VLASYGN 242

  Fly   188 VLLVSINYRLAPFGFLSALTDELPGNVALSDLQLALEWLQRNVVHFGGNAGQVTLVGQAGGATLA 252
            |:::::||||...||||.......||..|.||..||.|...|:..|||:..::|:.|...|.:..
  Rat   243 VIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCV 307

  Fly   253 HALSLSGRA-GN--------LFQQLILQSGTALNPYLIDNQPLDTLSTFARLARCPPPSINPSAQ 308
            :.|:||..: ||        |||:.|.||||||:.:.:..||       |:.||.....:..:..
  Rat   308 NLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQP-------AKYARILATKVGCNVS 365

  Fly   309 GLKPLYDCLARLPTSQLVAAFEQLLLQNEHLGLTQLGGFKLVVGDPLGFLPSHPASLATNSS-LA 372
            ....|.:||.:.|       :::|:.|:.......:....::.||   .:|..|..|..... |.
  Rat   366 DTVELVECLQKKP-------YKELVDQDVQPARYHIAFGPVIDGD---VIPDDPQILMEQGEFLN 420

  Fly   373 LPMIIGATKDASAFIVSRIYDQLARLQSRN----VSDYID---------VVLRHTAPPSEHRLWK 424
            ..:::|..:......|..|.|....:.:.:    ||:::|         .|||.|.    ..::.
  Rat   421 YDIMLGVNQGEGLKFVENIVDSDDGVSASDFDFAVSNFVDNLYGYPEGKDVLRETI----KFMYT 481

  Fly   425 QWALREIFTPIQEQTASLQTVAPGLLELSNYILYRAPVINS--ISQSYRSVPAYLYTFDYRGEHH 487
            .||.|.          :.:|....||.|.....:.||.:.:  :..::.| |.|.|.|    .||
  Rat   482 DWADRH----------NPETRRKTLLALFTDHQWVAPAVATADLHSNFGS-PTYFYAF----YHH 531

  Fly   488 RFGHLSNPLPFGVDASLSDDSVYLFPYP---PEASRLNPL-----DRSLSRALVTMWVNFATTGV 544
               ..::.:|...||:..|:..|:...|   |  :.|.|.     |..||..::|.|.|||.||.
  Rat   532 ---CQTDQVPAWADAAHGDEVPYVLGIPMIGP--TELFPCNFSKNDVMLSAVVMTYWTNFAKTGD 591

  Fly   545 PNPSSGVWPQATS---------EYGPFLRFTNNQQSPLE--LDPHFGEGIYLPNYR--------- 589
            ||...   ||.|.         |...:.|::...|..|.  |.|...|     :||         
  Rat   592 PNQPV---PQDTKFIHTKPNRFEEVAWTRYSQKDQLYLHIGLKPRVKE-----HYRANKVNLWLE 648

  Fly   590 -VIYKPTTNFSPPITTTTTTTTTTTTTSRPYAYN--------PYANWQNRPSQQ 634
             |.:....|.....|:|||...:|..|.||...|        |.|. |:.|.||
  Rat   649 LVPHLHNLNDISQYTSTTTKVPSTDITLRPTRKNSTPVTSAFPTAK-QDDPKQQ 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GltNP_001245946.1 COesterase 55..579 CDD:278561 158/629 (25%)
Aes <146..345 CDD:223730 65/262 (25%)
RILP-like <677..>717 CDD:304877
Nlgn1XP_038957495.1 COesterase 52..646 CDD:395084 161/646 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336129
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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