DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glt and ache

DIOPT Version :10

Sequence 1:NP_477504.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster
Sequence 2:NP_571921.1 Gene:ache / 114549 ZFINID:ZDB-GENE-010906-1 Length:634 Species:Danio rerio


Alignment Length:595 Identity:164/595 - (27%)
Similarity:247/595 - (41%) Gaps:123/595 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 YAQPQEAVVQAPEVGQILGISGHKTIANRP-VNAFLGIRYGTVGGGLARFQAAQPIGYQGRVNAT 117
            :||.:..:|.|..:|::.|.  ...:.:|. |.|||||.|.....|..||:.|:|......|...
Zfish    22 FAQAEPDLVVATRLGRVQGT--RLPVPDRSHVIAFLGIPYAEPPIGKRRFKRAEPKKPWNNVFEA 84

  Fly   118 VQSPN-CAQF-----PELDRLRLSESRGENVDDCLTLDIYAP--EGANQLPVLVFVHGEMLFDGG 174
            .:..| |.||     |....:.:........:|||.|:::.|  .....|.|:|:::|...:.|.
Zfish    85 KEFSNACYQFVDTSYPGFPGIEMWNPNRVMSEDCLYLNVWVPPTPRPQNLTVMVWIYGGGFYSGS 149

  Fly   175 SEEAQPD---YVLEKDVLLVSINYRLAPFGFLSAL--TDELPGNVALSDLQLALEWLQRNVVHFG 234
            |.....|   ....:.|::||:|||:..|||| ||  :.:.||||.|.|.:|||:|:|.|:..||
Zfish   150 SSLDVYDGRYLAYTEKVVVVSMNYRVGAFGFL-ALNGSSDAPGNVGLYDQRLALQWVQENIHFFG 213

  Fly   235 GNAGQVTLVGQAGGATLA--HALSLSGRAGNLFQQLILQSGTALNPYLIDNQPLDTLSTF----- 292
            ||..|||:.|::.||...  |.||...|.  ||.:.|||||       :.|.|..|: ||     
Zfish   214 GNPKQVTIFGESAGAASVGMHVLSPDSRP--LFTRAILQSG-------VPNTPWATV-TFDEARR 268

  Fly   293 -----ARLARCPPPSINPSAQGLKPLYDCLARLPTSQLVAAFEQLLLQNEHLGLTQLGGFKLV-V 351
                 .:|..|       :......|.|||......:|:....|:      |..:.|..|..| |
Zfish   269 RTTKLGKLVGC-------TWGNDTELIDCLRNKHPQELIDQEWQV------LPWSSLFRFSFVPV 320

  Fly   352 GDPLGFLPSHPASLATNSSLALPMII-----------------GATKDASAFIVSRIYDQLARLQ 399
            .|.: |.|..|.::.::.:.....|:                 |.:||..:.|....:.:..::.
Zfish   321 VDGV-FFPDTPDAMISSGNFKYTQILLGVNQDEGSYFLLYGAPGFSKDNESLISREDFLESVKMG 384

  Fly   400 SRNVSD--YIDVVLRHTAPPSEHRLWKQWAL-------REIFTPIQE------QTASL----QTV 445
            ..:.:|  ...|:|::|....|:...|....       :.:..|:|.      |.|:|    ...
Zfish   385 VPHANDIGLEAVILQYTDWMDENNGQKNRDAMDDIVGDQNVICPLQHFAKSYAQYAALHAQSSAA 449

  Fly   446 APGLLELSNYILYRAPVINSISQSYRSVPAYLYTFDYRGEHHRFGHLSNPLPFGVDASLSDDSVY 510
            |||.|...|    ..|...:...|:.:|  |||.||     ||..:|:.|...||......:  :
Zfish   450 APGTLGWGN----SGPTGYNSGNSHGAV--YLYLFD-----HRASNLAWPEWMGVIHGYEIE--F 501

  Fly   511 LFPYPPEASRLN--PLDRSLSRALVTMWVNFATTGVPN-------PSSGVWPQATSEYGPFLRFT 566
            :|..|.| .|||  ..:..|||.::..|.|||.||.||       .|...|||          |:
Zfish   502 VFGLPLE-KRLNYTAEEEKLSRRIMRYWANFARTGNPNVNTDGTMDSRRRWPQ----------FS 555

  Fly   567 NNQQSPLELD 576
            .|:|..:.|:
Zfish   556 ANEQKHVGLN 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GltNP_477504.1 COesterase 58..579 CDD:395084 162/591 (27%)
Casc1_N 681..>717 CDD:464947
acheNP_571921.1 COesterase 27..583 CDD:395084 162/590 (27%)
AChE_tetra 598..631 CDD:430146
Blue background indicates that the domain is not in the aligned region.

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