DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glt and nlgn3

DIOPT Version :9

Sequence 1:NP_001245946.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster
Sequence 2:XP_012823589.1 Gene:nlgn3 / 100329188 XenbaseID:XB-GENE-977261 Length:843 Species:Xenopus tropicalis


Alignment Length:847 Identity:190/847 - (22%)
Similarity:280/847 - (33%) Gaps:282/847 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 HSVGLRPDYNDYSDEDTRRDWLPEPLKPVPW------QSETRYAQPQEAVV----------QAPE 66
            |.|||:.              .|..|..|.|      :..:.:||.....|          :.|.
 Frog     2 HGVGLKV--------------APRKLSLVLWVLSVTSRVLSSHAQVYSQTVNTHYGKLRGTRVPL 52

  Fly    67 VGQILGISGHKTIANRPVNAFLGIRYGTVGGGLARFQAAQ-PIGYQGRVNATVQSPNCAQ----- 125
            ..:|||          ||:.:||:.|.....|..||...: |..:.|..|||..||.|.|     
 Frog    53 PSEILG----------PVDQYLGVPYAAPPVGEKRFLPPEPPPSWSGIRNATHFSPVCPQNIQNA 107

  Fly   126 -----FPELDRLRLSESRG---ENVDDCLTLDIYAP----------------------------- 153
                 .|......|....|   |..:|||.|:||.|                             
 Frog   108 VPDIMMPVWFTSNLDTVTGYLQEQSEDCLYLNIYVPTEDVKRISKECVRKPNKKICRKGGPSAKK 172

  Fly   154 ------------EG----ANQLPVLVFVHGEMLFDGGSEEAQPDYVLE-KDVLLVSINYRLAPFG 201
                        ||    ....||:|::||....:|.........:.. .:|:::::|||:...|
 Frog   173 QGEELSDNDEDEEGDIRDTGAKPVMVYIHGGSYMEGSGNMIDGSVLASYGNVVVITLNYRVGVLG 237

  Fly   202 FLSALTDELPGNVALSDLQLALEWLQRNVVHFGGNAGQVTLVGQAGGATLAHALSLSGRAGNLFQ 266
            |||.......||..|.|...||.|:..||..|||:..::|:.|...||:....|:||..:..|||
 Frog   238 FLSTGDQAAKGNYGLLDQIQALRWVSENVAFFGGDPHRITVFGSGIGASCVSLLTLSHHSEGLFQ 302

  Fly   267 QLILQSGTALNPYLIDNQPLDTLSTFARLARCPPPSINPSAQGLKPLYDCLARLPTSQLVAAFEQ 331
            :.|:|||:||:.:.::.||:......|....|       :......:.|||.:....:||....|
 Frog   303 RAIIQSGSALSSWAVNYQPVKYTRLLAEKVGC-------NVLDTVDMVDCLRQKSAKELVEQDIQ 360

  Fly   332 LLLQNEHLGLTQLGGFKLVVGDPLGFLPSHPASLATNSS-LALPMIIGATKDASAFIVSRIYDQL 395
            ....:...|       .::.||   .:|..|..|..... |...:::|..:......|..:.|..
 Frog   361 PARYHVAFG-------PVIDGD---VIPDDPEILMEQGEFLNYDIMLGVNQGEGLKFVENVVDAE 415

  Fly   396 ARLQSR----NVSDYIDVV---------LRHTAPPSEHRLWKQWALRE-----------IFTPIQ 436
            ..:...    :||:::|.:         ||.|.    ..::..||.|:           :||   
 Frog   416 DGVSGSDFDYSVSNFVDNLYGYPEGKDTLRETI----KFMYTDWADRDNPETRRKTLVALFT--- 473

  Fly   437 EQTASLQTVAPGLLELSNYILYRAPVINSISQSYRSVPAYLYTFDYRGEHHRFGHLSNPLPFGVD 501
                ..|.|.|.::....:..|.:             |.|.|.|     :|....|..|.  ..|
 Frog   474 ----DHQWVEPSVVTADLHARYGS-------------PTYFYAF-----YHHCQSLMKPA--WAD 514

  Fly   502 ASLSDDSVYLFPYPPEASRLNPLDR----------SLSRALVTMWVNFATTGVPNPSSGVWPQAT 556
            |:..|:..|:|..|    .:.|.|.          .||..::|.|.|||.||.||...   ||.|
 Frog   515 AAHGDEVPYVFGVP----MVGPTDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNKPV---PQDT 572

  Fly   557 ---------------SEYGPFLRFTNNQQSPLELDPHFGEGIYLPNYRVIYKPT-----TNFSPP 601
                           |:|.|        :..|.|  |.|   ..|..|..|:.|     .:..|.
 Frog   573 KFIHTKANRFEEVAWSKYNP--------RDQLYL--HIG---LKPRVRDHYRATKVAFWKHLVPH 624

  Fly   602 I---------TTTTT------TTTTTTTTSRPYAYN------------PYANWQNRPSQQHPNWH 639
            :         |:|||      ||..:..|.||..::            |.|.|.       |...
 Frog   625 LYNLHDMFHYTSTTTKVPPSDTTQNSHITRRPKVWDTKRPGVSPTFNGPVAKWD-------PELD 682

  Fly   640 PADPEYVRAQEARQQEF--------------------IREREQRRREQQLRDQQRYPQ-QEPREQ 683
            |.||..::.......|.                    :..|..:||:    |.||.|. |.|...
 Frog   683 PVDPVVIQDPRDYSTELSVTIAVGASLLFLNVLAFAALYYRNDKRRQ----DTQRQPSPQRPAVT 743

  Fly   684 QD 685
            :|
 Frog   744 RD 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GltNP_001245946.1 COesterase 55..579 CDD:278561 148/643 (23%)
Aes <146..345 CDD:223730 60/244 (25%)
RILP-like <677..>717 CDD:304877 3/10 (30%)
nlgn3XP_012823589.1 COesterase 31..618 CDD:278561 154/664 (23%)
Aes <195..>302 CDD:223730 34/106 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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