DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glt and nlgn1

DIOPT Version :10

Sequence 1:NP_477504.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster
Sequence 2:XP_017949302.2 Gene:nlgn1 / 100329186 XenbaseID:XB-GENE-6041753 Length:859 Species:Xenopus tropicalis


Alignment Length:694 Identity:181/694 - (26%)
Similarity:266/694 - (38%) Gaps:184/694 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 GQILGISGHKTIANR---PVNAFLGIRYGTVGGGLARFQAAQPIGYQGRV-NATVQSPNCAQ--- 125
            |::.|..  |.:.|.   ||..|||:.|.....|..|||..:|....|.: |:|..:|.|.|   
 Frog    60 GKVRGFK--KELNNEILGPVVQFLGVPYAAPPIGERRFQPPEPPTMWGDIKNSTQFAPVCPQNIV 122

  Fly   126 ---FPE----------LDRLRLSESRGENVDDCLTLDIYAP------------------------ 153
               .||          ||  .:|....:..:|||.|:||.|                        
 Frog   123 GGRLPEVMLPVWFTNNLD--VVSSYVQDQSEDCLYLNIYVPTEDVKRISKECARKPGKKICRKEG 185

  Fly   154 -------------EGANQ---------LPVLVFVHGEM-------LFDGGSEEAQPDYVLEK--D 187
                         |||..         .||:|::||..       :|||.        ||..  :
 Frog   186 PLTKKQTDDLGDNEGAEDEDIRDSGGPKPVMVYIHGGSYMEGTGNVFDGS--------VLASYGN 242

  Fly   188 VLLVSINYRLAPFGFLSALTDELPGNVALSDLQLALEWLQRNVVHFGGNAGQVTLVGQAGGATLA 252
            |:::::||||...||||.......||..|.||..||.|...|:..|||:..::|:.|...||:..
 Frog   243 VIVITVNYRLGVLGFLSTGDQASKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGASCV 307

  Fly   253 HALSLSGRA-GN--------LFQQLILQSGTALNPYLIDNQPLDTLSTFARLARCPPPSINPSAQ 308
            :.|:||..: ||        |||:.|.||||||:.:.:..||.......|....|     |.|..
 Frog   308 NLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQPAKYARILATKVGC-----NMSDS 367

  Fly   309 GLKPLYDCLARLPTSQLVAAFEQLLLQNEHLGLTQLGGFKLVVGDPLGFLPSHPASLATNSS-LA 372
            |  .|.:||.:.|..:||....|.:..:...|       .::.||   .:|..|..|..... |.
 Frog   368 G--ELVECLQKKPYRELVDQDIQPVRYHIAFG-------PVIDGD---VIPDDPQVLMEQGEFLN 420

  Fly   373 LPMIIGATKDASAFIVSRIYDQLARLQSRN----VSDYIDVVLRHTAPPSEHR-----LWKQWAL 428
            ..:::|..:......|....|....:.|.:    ||:::|.:..:|......|     ::..||.
 Frog   421 YDIMLGVNQGEGLKFVESTVDHEDGVSSSDFDFAVSNFVDNLYGYTEGKDILRETIKFMYTDWAD 485

  Fly   429 REIFTPIQEQTASLQTVAPGLLELSNYILYRAPVINS--ISQSYRSVPAYLYTFDYRGEHHRFGH 491
            |.          :.:|....||.|.....:.||.:.:  :..::.| |.|.|.|    .||   .
 Frog   486 RN----------NPETRRKTLLALFTDHQWVAPAVATADLHSNFGS-PTYFYAF----YHH---C 532

  Fly   492 LSNPLPFGVDASLSDDSVYLFPYP---PEASRLNPL-----DRSLSRALVTMWVNFATTGVPNPS 548
            .::.:|...|||..|:..|:|..|   |  :.|.|.     |..||..::|.|.|||.||.||..
 Frog   533 QTDQVPAWADASHGDEIPYVFGIPMIGP--TELFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQP 595

  Fly   549 SGVWPQATS---------EYGPFLRFTNNQQSPLE--LDPHFGE-------GIYL---PNYRVIY 592
            .   ||.|.         |...:.|::...|..|.  |.|...|       .::|   |...|:.
 Frog   596 V---PQDTKFIHTKPNRFEEVAWTRYSQKDQLYLHIGLKPRVKEHYRATKVNLWLELVPRLHVMN 657

  Fly   593 KPTTNFSP--PITTTTTTTTTTTTTSRPYAYNPYA--NWQNRPS 632
            ..||...|  .||:..|.:.|...||   |:...:  |::.:||
 Frog   658 DLTTTKGPSTDITSKPTGSNTVPVTS---AFPTVSEDNFKQKPS 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GltNP_477504.1 COesterase 58..579 CDD:395084 164/625 (26%)
Casc1_N 681..>717 CDD:464947
nlgn1XP_017949302.2 COesterase 52..646 CDD:395084 165/637 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.