DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sema1a and HMCN1

DIOPT Version :9

Sequence 1:NP_001260265.1 Gene:Sema1a / 34192 FlyBaseID:FBgn0011259 Length:1131 Species:Drosophila melanogaster
Sequence 2:NP_114141.2 Gene:HMCN1 / 83872 HGNCID:19194 Length:5635 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sema1aNP_001260265.1 Sema_1A 91..546 CDD:200498
PSI 545..>579 CDD:214655
HMCN1NP_114141.2 VWA_2 42..212 CDD:290253
IG_like 440..512 CDD:214653
Ig 451..510 CDD:299845
IG 526..608 CDD:214652
IGc2 533..593 CDD:197706
I-set 612..696 CDD:254352
Ig 626..696 CDD:299845
IG 708..789 CDD:214652
Ig 720..786 CDD:143165
Ig 792..884 CDD:299845
I-set 793..884 CDD:254352
I-set 890..977 CDD:254352
IGc2 903..967 CDD:197706
Ig 980..1071 CDD:299845
IG 1086..1167 CDD:214652
Ig 1086..1167 CDD:299845
I-set 1171..1258 CDD:254352
Ig 1188..1256 CDD:299845
Ig 1261..1357 CDD:299845
IG_like 1276..1355 CDD:214653
IG_like 1369..1448 CDD:214653
IGc2 1382..1438 CDD:197706
I-set 1452..1542 CDD:254352
Ig 1460..1542 CDD:299845
IG 1556..1635 CDD:214652
Ig 1557..1635 CDD:299845
I-set 1647..1729 CDD:254352
Ig 1648..1725 CDD:299845
IGc2 1752..1812 CDD:197706
IG_like 1843..1915 CDD:214653
IGc2 1843..1905 CDD:197706
IG 1929..2008 CDD:214652
Ig 1934..2008 CDD:299845
Ig 2031..2092 CDD:299845
I-set 2111..2191 CDD:254352
IGc2 2119..2181 CDD:197706
I-set 2203..2286 CDD:254352
Ig <2222..2277 CDD:299845
IG_like 2299..2380 CDD:214653
Ig 2299..2370 CDD:299845
I-set 2391..2474 CDD:254352
IGc2 2400..2464 CDD:197706
I-set 2478..2567 CDD:254352
IGc2 2493..2557 CDD:197706
I-set 2582..2663 CDD:254352
IGc2 2594..2653 CDD:197706
I-set 2681..2762 CDD:254352
IGc2 2689..2752 CDD:197706
IG_like 2789..2865 CDD:214653
IGc2 2791..2855 CDD:197706
I-set 2879..2960 CDD:254352
Ig 2879..2950 CDD:299845
Ig 2963..3054 CDD:299845
I-set 2970..3052 CDD:254352
I-set 3066..3147 CDD:254352
IGc2 3073..3137 CDD:197706
I-set 3151..3241 CDD:254352
IGc2 3167..3228 CDD:197706
Ig 3244..3338 CDD:299845
I-set 3252..3336 CDD:254352
I-set 3356..3430 CDD:254352
IGc2 3357..3420 CDD:197706
Ig 3433..3523 CDD:299845
IG_like 3443..3523 CDD:214653
IG_like 3536..3616 CDD:214653
IGc2 3543..3606 CDD:197706
I-set 3628..3709 CDD:254352
IGc2 3636..3699 CDD:197706
I-set 3719..3800 CDD:254352
Ig 3719..3795 CDD:299845
I-set 3804..3893 CDD:254352
Ig 3810..3883 CDD:299845
Ig 3896..3984 CDD:299845
IG_like 3903..3984 CDD:214653
Ig 3987..4067 CDD:299845
IG 3994..4075 CDD:214652
I-set 4079..4165 CDD:254352
IGc2 4093..4155 CDD:197706
Ig 4168..4258 CDD:299845
IG_like 4176..4256 CDD:214653
I-set 4260..4345 CDD:254352
IGc2 4274..4335 CDD:197706
IG 4356..4435 CDD:214652
Ig 4356..4435 CDD:299845
I-set 4440..4526 CDD:254352
Ig 4443..4521 CDD:299845
TSP1 4533..4584 CDD:214559
TSP1 4589..4641 CDD:214559
TSP1 4646..4698 CDD:214559
TSP1 4703..4755 CDD:214559
TSP1 4760..4812 CDD:214559
TSP1 4817..4869 CDD:214559
G2F 4868..5092 CDD:214774
EGF_CA 5107..5146 CDD:214542
EGF_CA 5147..5190 CDD:284955
EGF_CA 5192..5228 CDD:214542
EGF_CA 5230..5263 CDD:238011
EGF_CA 5272..5313 CDD:284955
EGF_CA 5315..5354 CDD:214542
EGF_CA 5432..5471 CDD:214542
EGF_CA 5472..5508 CDD:214542
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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