DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sema1a and SEMA4G

DIOPT Version :9

Sequence 1:NP_001260265.1 Gene:Sema1a / 34192 FlyBaseID:FBgn0011259 Length:1131 Species:Drosophila melanogaster
Sequence 2:NP_060363.2 Gene:SEMA4G / 57715 HGNCID:10735 Length:843 Species:Homo sapiens


Alignment Length:1091 Identity:255/1091 - (23%)
Similarity:385/1091 - (35%) Gaps:347/1091 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 YGYGWMQVFLLLTVLVIGNQSAWQENIRPKLYVELGPEDVLKFVGNESVVDHFK---------LV 100
            :|..|..:..:||...:...|.    .||...::..|...:.: ...|...|||         |:
Human     2 WGRLWPLLLSILTATAVPGPSL----RRPSRELDATPRMTIPY-EELSGTRHFKGQAQNYSTLLL 61

  Fly   101 TKDGNSLLIGARNTVFNLSIHDLVE--QQRLVW-TSPEDDTKMCLVKGKDEEA-CQNYIRIMVVP 161
            .:....||:|||..:|:||.:|:.:  .:.:.| .|||..:| |..|||:.:. |.|::|.:...
Human    62 EEASARLLVGARGALFSLSANDIGDGAHKEIHWEASPEMQSK-CHQKGKNNQTECFNHVRFLQRL 125

  Fly   162 SPGRLFVCGTNSFRPMCNTYIISDSNYTLEAT-KNGQAVCPYDPRHNSTSVLADNELYSGTVADF 225
            :...|:.|||::|:|:|..  |....:||..: :.|:..|||||....|.::.|..||:.|..:|
Human   126 NSTHLYACGTHAFQPLCAA--IDAEAFTLPTSFEEGKEKCPYDPARGFTGLIIDGGLYTATRYEF 188

  Fly   226 SGSDPIIYR----EPLQTEQYDSLSLNAPNFV----------SSFTQGDFVYFFFRETAVEFINC 276
            . |.|.|.|    ..|:||:.....||...||          |:....|.||:||.|.|.|.   
Human   189 R-SIPDIRRSRHPHSLRTEETPMHWLNDAEFVFSVLVRESKASAVGDDDKVYYFFTERATEE--- 249

  Fly   277 GKAIY---------SRVARVCKWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQSASNLV 332
            |...:         :|||||||.|.||....:.:||||||:||.|.||     .:..::...:| 
Human   250 GSGSFTQSRSSHRVARVARVCKGDLGGKKILQKKWTSFLKARLICHIP-----LYETLRGVCSL- 308

  Fly   333 EGQYGSMSSKLIYGVF--NTPSNSIPGSAVCAFALQDIADTFEGQFKEQTGINSNWLPVNNAKVP 395
            :.:..|.:.  .|..|  :|...::..||:|.:.|.:|...|.|.:.|....:..|...... ||
Human   309 DAETSSRTH--FYAAFTLSTQWKTLEASAICRYDLAEIQAVFAGPYMEYQDGSRRWGRYEGG-VP 370

  Fly   396 DPRPGSC---------HNDSRALPDPTLNFIKTHSLMDENVPAFFSQPILVRTSTIYRFTQIAVD 451
            :||||||         :|.|:.||...|:|:|.|.||...|.....:|:|::.:  .|:|.: ..
Human   371 EPRPGSCITDSLRSQGYNSSQDLPSLVLDFVKLHPLMARPVVPTRGRPLLLKRN--IRYTHL-TG 432

  Fly   452 AQIKTPGGKTYDVIFVGTDHGKIIKSVNAESADSADKVTSVVIEEIDVLTKSEPIRNLEIVRTMQ 516
            ..:.||.|.|||::|:||..|.|.|:|...|.       ..:|||..|..:|:.:.|| ::..:|
Human   433 TPVTTPAGPTYDLLFLGTADGWIHKAVVLGSG-------MHIIEETQVFRESQSVENL-VISLLQ 489

  Fly   517 YDQPKDGSYDDGKLIIVTDSQVVAIQLHRCHNDKITSCSECVALQDPYCAWDKIAGKCRSHGAPR 581
            :           .|.:...|.|:.:.|..|  .:..||.:|:..:||||.||             
Human   490 H-----------SLYVGAPSGVIQLPLSSC--SRYRSCYDCILARDPYCGWD------------- 528

  Fly   582 WLEENYFYQNVATGQHAACPSGKINSKDANAGEQKGFRNDMDLLDSRRQSKDQEIIDNIDKNFEG 646
                        .|.||...:..|    ||                |.|.....:|.:|::.   
Human   529 ------------PGTHACAAATTI----AN----------------RSQGSRTALIQDIERG--- 558

  Fly   647 PQISADIINAQYTVETLVMAVLAGSIFSLLVGFFTGYFCGRRCHKDEDDNLPYPDTEYEYFEQRQ 711
                                                   .|.|....|...|.|           
Human   559 ---------------------------------------NRGCESSRDTGPPPP----------- 573

  Fly   712 NVNSFPSSCRIQQEPKLLPQVEEVTYAEPVLLPQPPPPNKMHSPKNTLRKPPMHQMHQGPNSETL 776
                              .:...|...:.||||...|.|...:                      
Human   574 ------------------LKTRSVLRGDDVLLPCDQPSNLARA---------------------- 598

  Fly   777 FQFQPDGYNTQQSYRGRDNFGTLRSHQVMGD---NYRRG-DGFSTTRSVKKAVNNTNTRNRSLGR 837
                               ...|.....:.|   .||.| ||...|.:                 
Human   599 -------------------LWLLNGSMGLSDGQGGYRVGVDGLLVTDA----------------- 627

  Fly   838 ARRQPPRHGIVTQHRSNSPQQQQQQSQQPHSSSGSSPVMSNSSSSPAPPS-SSPSPQESPK-NCS 900
               ||       :|..|.....::...:...:|.|..|.. ::.:|||.: ::|..|.:|. ...
Human   628 ---QP-------EHSGNYGCYAEENGLRTLLASYSLTVRP-ATPAPAPKAPATPGAQLAPDVRLL 681

  Fly   901 YIYRDXLICNTKSMPLIQAQSTHAQPHPQSHPHPLPPPGPTTPPAQPRARSPMIGRTYAKSMPVT 965
            |:   ..|.....:.||.|.|             |..........:.|.|...:||  |.....:
Human   682 YV---LAIAALGGLCLILASS-------------LLYVACLREGRRGRRRKYSLGR--ASRAGGS 728

  Fly   966 PVQPQSPLAETPSYELYERHSDAATFHFGDEDDDDDDEHDHEDTSSLAMI------TPPPPYDTP 1024
            .||.|:...:.|                |:||:.||:.....:.|.|.:|      .||||    
Human   729 AVQLQTVSGQCP----------------GEEDEGDDEGAGGLEGSCLQIIPGEGAPAPPPP---- 773

  Fly  1025 HLIASPPLPPP--------------RRFRFGNRELFSMSPAGGGATPTASA 1061
                 ||.|||              ||....:..|...|..|..|.|.:.|
Human   774 -----PPPPPPAELTNGLVALPSRLRRMNGNSYVLLRQSNNGVPAGPCSFA 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sema1aNP_001260265.1 Sema_1A 91..546 CDD:200498 153/502 (30%)
PSI 545..>579 CDD:214655 10/33 (30%)
SEMA4GNP_060363.2 Sema_4G 47..506 CDD:200523 151/496 (30%)
PSI 507..557 CDD:307546 20/96 (21%)
Ig_Sema4B_like 572..655 CDD:143280 22/179 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 728..782 21/78 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3611
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11036
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

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