Sequence 1: | NP_001260265.1 | Gene: | Sema1a / 34192 | FlyBaseID: | FBgn0011259 | Length: | 1131 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038960912.1 | Gene: | Sema6d / 311384 | RGDID: | 1310910 | Length: | 1086 | Species: | Rattus norvegicus |
Alignment Length: | 1112 | Identity: | 331/1112 - (29%) |
---|---|---|---|
Similarity: | 477/1112 - (42%) | Gaps: | 248/1112 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 89 GNESVVDH---FKLVTKDGNSLLIGARNTVFNLSIHDL-----VEQQRLVWTSPEDDTKMCLVKG 145
Fly 146 KDEEACQNYIRIMVVPSPGRLFVCGTNSFRPMCNTYIISDSNYTLEATKNGQAVCPYDPRHNSTS 210
Fly 211 VLADNELYSGTVADFSGSDPIIYR-----EPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETA 270
Fly 271 VEFINCGKAIYSRVARVCKWDKGGPHR-FRNRWTSFLKSRLNCSIPGDYPFYFNEIQSASNLVEG 334
Fly 335 QYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIADTFEGQFKEQTGINSNWLPVNNAKVPDPRP 399
Fly 400 GSC--------HNDSRALPDPTLNFIKTHSLMDENVPAFFSQPILVRTSTIYRFTQIAVDAQIKT 456
Fly 457 PGG-KTYDVIFVGTDHGKIIKSVNAESADSADKVTSVVIEEIDVL------TKSEPIRNLEIVRT 514
Fly 515 MQYDQPKDGSYDDGKLIIVTDSQVVAIQLHRCHNDKITSCSE-CVALQDPYCAWDKIAGKC---- 574
Fly 575 -------------RSHGAPRWLEENYFYQNVA-TGQ-HAACP----------------------- 601
Fly 602 ------SGKINSKDANAGEQKGFRNDMDLLDSRR--------QSKDQEIIDNIDKNFEGPQISAD 652
Fly 653 IINAQYTVETLVMAVLAGSIFSLLVGFFTG--YFC--------GRRCHKDEDDNLPYPDTEYEYF 707
Fly 708 -----------EQRQNV------------------NSFPSSCRIQ---QEPKL--LPQVEEVTYA 738
Fly 739 EPVLLPQPPPPNKMHSPK----NTLRK---------PPMHQ-MHQG--PNSETLFQFQPDGYNTQ 787
Fly 788 QSYRGRDNFGTLRSHQVMGDNYRRGDGFSTTRSVKKAVNNTNTRNRSLGRARRQPPRHGIVTQHR 852
Fly 853 SNSPQQQQQ----QSQQPHSSSGSSPVMSNSSSSPAPPSSSPS----PQESPKNCSYIYRDXLIC 909
Fly 910 NTKSMPL--IQAQSTHAQPHPQSHPHPLPPPGPTTPPAQPRARSPMIGR------------TYAK 960
Fly 961 SMPVTPVQPQSPLAETPSYELYERHSDAATFHFGDEDDDDDDEHDHEDTSSLAMITPPPPYDTPH 1025
Fly 1026 LIASPPL 1032 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1a | NP_001260265.1 | Sema_1A | 91..546 | CDD:200498 | 197/483 (41%) |
PSI | 545..>579 | CDD:214655 | 14/51 (27%) | ||
Sema6d | XP_038960912.1 | Sema | 49..513 | CDD:417757 | 198/483 (41%) |
PSI | 514..>543 | CDD:396154 | 13/31 (42%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 319 | 1.000 | Domainoid score | I1206 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 377 | 1.000 | Inparanoid score | I2014 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000892 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8939 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101616 | |
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X415 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.860 |