Sequence 1: | NP_001260265.1 | Gene: | Sema1a / 34192 | FlyBaseID: | FBgn0011259 | Length: | 1131 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101129.1 | Gene: | Sema5a / 310207 | RGDID: | 1308650 | Length: | 1074 | Species: | Rattus norvegicus |
Alignment Length: | 955 | Identity: | 292/955 - (30%) |
---|---|---|---|
Similarity: | 410/955 - (42%) | Gaps: | 213/955 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 76 YVELGPEDVLKFVGNESVVDHFKLVTKDG-NSLLIGARNTVFNLSIHDLVEQQRLVWTSPEDDTK 139
Fly 140 MCLVKGKDEEACQNYIRIMVVPSPGRLFVCGTNSFRPMCNTYIISDSNYT-LEATKNGQAVCPYD 203
Fly 204 PRHNSTSVL-ADNELYSGTVADFSGSDPIIYRE-----PLQTEQYDSLSLNAPNFVSSFTQGDFV 262
Fly 263 YFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQS 327
Fly 328 ASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIADTFEGQFKEQTGINSNWLPVNNA 392
Fly 393 KVPDPRPG-SC---------HNDSRALPDPTLNFIKTHSLMD--ENVPAFFSQPILVRTSTIYRF 445
Fly 446 TQIAVDAQIKTPGGKT-YDVIFVGTDHGKIIKSVNAESADSADKVTSVVIEEIDVL--TKSEPIR 507
Fly 508 NLEIVRTMQYDQPKDGSYDDGKLIIVTDSQVVAIQLHRCHNDKITSCSECVALQDPYCAWDKIAG 572
Fly 573 KCRSHGAPRWLEEN----YFYQNVATGQHAACPSGKINSKDANAGEQKGF----RNDMDLLDS-- 627
Fly 628 -RRQSKDQEIIDNIDKNFEGPQISADIINAQ----YTVET--LVMAVLAGSIFS----------- 674
Fly 675 -----LLVG------------------FFTGYFCGRRCHKDEDDNLPYPDTEYEYFEQRQNVNSF 716
Fly 717 P--SSCRIQQEP---KLLPQVEEVTYAEPVLLPQPPPPNKMHSPKNTLRKPPMHQMHQGPNSETL 776
Fly 777 FQFQ-----PD-------GYNTQQSYRGRDNFGTLRSHQVMGDNYRRGDGFSTTRSVKKAVNNTN 829
Fly 830 TRNRSLGRARRQPPRHGIVTQHR-SNSPQQQ-------------QQQSQQPHSSSGSSPVMSNSS 880
Fly 881 SSPAP----------PSSSPSPQESPKNCSYIYRDXLICNTKSMP 915 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1a | NP_001260265.1 | Sema_1A | 91..546 | CDD:200498 | 198/477 (42%) |
PSI | 545..>579 | CDD:214655 | 14/33 (42%) | ||
Sema5a | NP_001101129.1 | Sema_5A | 50..485 | CDD:200524 | 197/478 (41%) |
PSI | 486..533 | CDD:279745 | 20/59 (34%) | ||
TSP1 | 544..595 | CDD:214559 | 11/52 (21%) | ||
TSP1 | 598..651 | CDD:214559 | 6/52 (12%) | ||
TSP1 | 656..702 | CDD:214559 | 8/54 (15%) | ||
TSP1 | 787..839 | CDD:214559 | 10/52 (19%) | ||
TSP1 | 853..896 | CDD:214559 | 7/42 (17%) | ||
TSP1 | 899..940 | CDD:214559 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |