| Sequence 1: | NP_001260265.1 | Gene: | Sema1a / 34192 | FlyBaseID: | FBgn0011259 | Length: | 1131 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_017177063.1 | Gene: | Sspo / 243369 | MGIID: | 2674311 | Length: | 5197 | Species: | Mus musculus |
| Alignment Length: | 1147 | Identity: | 208/1147 - (18%) |
|---|---|---|---|
| Similarity: | 293/1147 - (25%) | Gaps: | 527/1147 - (45%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 136 DDTKMCLVKGKDEEACQNYIRIMVVP--------SPGRLFVCGTNSFRPMCNTYIISDSNYTLEA 192
Fly 193 TKNGQAVCPYDPRHNSTSVLADNELYSGTVADFSGSDPIIYREPLQTEQYDSLSLNAPNFVSSFT 257
Fly 258 QGDFVYFFF-------------RETAVEFINCGKAIYSRVARVCKWDKGGP-------------H 296
Fly 297 RFRNRWTSFLKSRLNCSIPGDYPFYFNEIQSASNL-------VEGQYGSMSSKLIYGVFNTPSNS 354
Fly 355 IPGSAVCAFALQDIADTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKT 419
Fly 420 HSLMDENVPAFFSQPILVRTSTIYRFTQIAVDAQIKTPGGKTYDVIFVGTDHGKIIKSVNAESAD 484
Fly 485 SADKVTSVVIEEIDVLTKSEPIRNLEIVRTMQYDQPKDGSY--------DDGKLIIVTDSQVVAI 541
Fly 542 QLHRCHNDKITSCSECVALQDPYCA----------WDKIAGKC---------RSHGAPRWLEENY 587
Fly 588 FYQNVATGQHAAC-----PSGKINSKDANAGEQKGFRNDMDLLDSRRQSKDQEIIDNIDKNFE-G 646
Fly 647 PQISADIINAQYTVETLVMAVLAGSI---FSLLVGFFTGYFCGRRCHKDEDDNLPYPDTEYEYFE 708
Fly 709 QRQNV----------NSFPSSCRIQQEPKLLPQV------------------------------- 732
Fly 733 ---EEVTYAEPVLLPQPPP---------------------------------------------- 748
Fly 749 ----------PNKMHSPKNTLRKP---PMHQMHQGPNSETLFQFQPDGYNTQQSYRG--RDNFGT 798
Fly 799 LRSHQVM---------------------GDNYRRGDG---------------------------- 814
Fly 815 FSTTRSVKKAVNNTNTRNRSLGRARRQP---PRHGIVTQHRSNSPQQQQQQSQQPHSSSGSSPVM 876
Fly 877 SNSSSSPAPPSSSPSPQESPKNCSYIYRDXLICNTKSM-PLIQAQSTHAQPHPQSHPHPLPPPGP 940
Fly 941 TTPPAQPRARSPMIGRTYAKSMPVTPVQ-PQSPLAETPSYELYERHSDAATFHFGDED--DDDDD 1002
Fly 1003 EHDHEDTSSLAMITPPPPYDTPHLIASPPLPPPRRFRFGNRE 1044 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Sema1a | NP_001260265.1 | Sema_1A | 91..546 | CDD:200498 | 83/458 (18%) |
| PSI | 545..>579 | CDD:214655 | 10/52 (19%) | ||
| Sspo | XP_017177063.1 | VWD | 229..378 | CDD:214566 | |
| C8 | 434..505 | CDD:370094 | |||
| TIL | 509..564 | CDD:366828 | |||
| VWD | 593..753 | CDD:214566 | |||
| C8 | 791..863 | CDD:214843 | |||
| TIL | 866..919 | CDD:366828 | |||
| VWD | 1054..1201 | CDD:365869 | |||
| C8 | 1245..1311 | CDD:370094 | |||
| TIL | 1315..1371 | CDD:366828 | |||
| LDLa | 1416..1451 | CDD:238060 | |||
| LDLa | 1456..1490 | CDD:238060 | |||
| LDLa | 1492..1526 | CDD:238060 | |||
| LDLa | 1532..1563 | CDD:197566 | |||
| Ldl_recept_a | 1603..1639 | CDD:365841 | 5/14 (36%) | ||
| TSP1 | 1737..1788 | CDD:214559 | 15/60 (25%) | ||
| TIL | 1857..1908 | CDD:366828 | 11/80 (14%) | ||
| TSP1 | 1952..2005 | CDD:214559 | 9/63 (14%) | ||
| FA58C | <2142..2262 | CDD:330301 | 16/123 (13%) | ||
| LDLa | 2275..2309 | CDD:238060 | 3/33 (9%) | ||
| LDLa | 2414..2448 | CDD:238060 | 11/47 (23%) | ||
| LDLa | 2471..2505 | CDD:238060 | 4/12 (33%) | ||
| TSP1 | 2565..2617 | CDD:214559 | |||
| TIL | 2640..2682 | CDD:366828 | |||
| TSP1 | 2725..2774 | CDD:214559 | |||
| TSP_1 | 2841..2889 | CDD:365867 | |||
| TIL | 2893..2952 | CDD:366828 | |||
| VWC_out | 2954..3001 | CDD:214565 | |||
| TSP1 | 2994..3045 | CDD:214559 | |||
| TIL | 3097..3149 | CDD:366828 | |||
| TSP1 | 3193..3256 | CDD:214559 | |||
| TSP1 | 3262..3314 | CDD:214559 | |||
| TIL | 3322..3372 | CDD:366828 | |||
| TSP1 | 3418..>3458 | CDD:214559 | |||
| TSP1 | 3482..3526 | CDD:214559 | |||
| TIL | 3536..3592 | CDD:366828 | |||
| TSP1 | 3655..3699 | CDD:214559 | |||
| TSP1 | 3832..3884 | CDD:214559 | |||
| TSP1 | 3901..3949 | CDD:214559 | |||
| TSP1 | 3967..4020 | CDD:214559 | |||
| TSP1 | 4025..4077 | CDD:214559 | |||
| TIL | 4080..4135 | CDD:366828 | |||
| TSP1 | 4180..4230 | CDD:214559 | |||
| TSP1 | 4274..4325 | CDD:214559 | |||
| TSP1 | 4389..4440 | CDD:214559 | |||
| TIL | 4444..4499 | CDD:366828 | |||
| TSP1 | 4639..4687 | CDD:214559 | |||
| TIL | 4701..4747 | CDD:366828 | |||
| TSP1 | 4791..4840 | CDD:214559 | |||
| TIL | 4842..4896 | CDD:366828 | |||
| TIL | 4948..5006 | CDD:366828 | |||
| VWC | 5008..5063 | CDD:327433 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||