Sequence 1: | NP_001260265.1 | Gene: | Sema1a / 34192 | FlyBaseID: | FBgn0011259 | Length: | 1131 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_035480.3 | Gene: | Sema4f / 20355 | MGIID: | 1340055 | Length: | 777 | Species: | Mus musculus |
Alignment Length: | 742 | Identity: | 205/742 - (27%) |
---|---|---|---|
Similarity: | 321/742 - (43%) | Gaps: | 148/742 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 99 LVTKDGNSLLIGARNTVFNLSIHDLVEQ-QRLVWTSPEDDTKMCLVKGKDEEACQNYIRIMVVPS 162
Fly 163 PGRLFVCGTNSFRPMCNTYIISDSNYTLEATKNGQAVCPYDPRHNSTSVLADNELYSGTVADFSG 227
Fly 228 SDPIIYREPLQTEQY---DSLS--LNAPNFVSSFTQG----------DFVYFFFRETAVEFINCG 277
Fly 278 KAIYSRVARVCKWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQSASNLVEG------QY 336
Fly 337 GSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIADTFEGQFKEQTGINSNWLPVNNAKVPDPRPGS 401
Fly 402 C---------HNDSRALPDPTLNFIKTHSLMDENVPAFFSQPILVRTSTIYRFTQIAVDA-QIKT 456
Fly 457 PGGKTYDVIFVGTDHGKIIKSVNAESADSADKVTSVVIEEIDVLTKSEPIRNLEIVRTMQYDQPK 521
Fly 522 DGSYDDGKLIIVTDSQVVAIQLHRCHNDKITSCSECVALQDPYCAWDKIAGKCRSH-GAPRWLEE 585
Fly 586 N-------------------YFYQNVATGQHAACPSGKINSKDANAGEQKGFRNDMDLLDSRRQS 631
Fly 632 KDQEIIDNIDKNF--EGPQISADIINAQYTV------------ETLVMAVLAGSIFSLLVGFFTG 682
Fly 683 YFCGRRCHKDEDDNL-------------PYPDTEYEYFEQRQNVNSFPSSCRIQQEPKLLPQVEE 734
Fly 735 VTYA------------EPVLLPQPPPP 749 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1a | NP_001260265.1 | Sema_1A | 91..546 | CDD:200498 | 151/478 (32%) |
PSI | 545..>579 | CDD:214655 | 14/34 (41%) | ||
Sema4f | NP_035480.3 | Sema_4F | 58..517 | CDD:200522 | 151/476 (32%) |
PSI | 518..569 | CDD:279745 | 16/52 (31%) | ||
Ig | 576..655 | CDD:299845 | 14/81 (17%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 703..742 | 8/55 (15%) | |||
PDZ-binding. /evidence=ECO:0000269|PubMed:11483650 | 775..777 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |