Sequence 1: | NP_001260265.1 | Gene: | Sema1a / 34192 | FlyBaseID: | FBgn0011259 | Length: | 1131 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017168715.1 | Gene: | Sema3f / 20350 | MGIID: | 1096347 | Length: | 820 | Species: | Mus musculus |
Alignment Length: | 889 | Identity: | 225/889 - (25%) |
---|---|---|---|
Similarity: | 372/889 - (41%) | Gaps: | 253/889 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 53 FLLLTVLVIGNQSAW-----QENIRPKLYVELGPEDVLKFVGNESVVDHF------------KLV 100
Fly 101 TKDGNSLLIGARNTVFNLSIHDLVEQQRLV-WTSPEDDTKMCLVKGKDEEA-CQNYIRIMVVPSP 163
Fly 164 GRLFVCGTNSFRPMCNTYI------------------------------------ISDSNYTLEA 192
Fly 193 TK--NGQAVCPYDPRHNSTSVLADNELYSGTVADFSGSDPIIYR-----EPLQTEQYDSLSLNAP 250
Fly 251 NFV-------SSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKS 308
Fly 309 RLNCSIPGD--YPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIADT 371
Fly 372 FEGQFKEQTGINSNWLPVNNAKVPDPRPGSC--------HNDSRALPDPTLNFIKTHSLMDENVP 428
Fly 429 AFFSQPILVRTSTIYRFTQIAVDAQIKTPGGKTYDVIFVGTDHGKIIKSVNAESADSADKVTSVV 493
Fly 494 IEEIDVLTKSEPIRNLEIVRTMQYDQPKDGSYDDGKLIIVTDSQVVAIQLHRCHNDKITSCSECV 558
Fly 559 ALQDPYCAWD-------KIAGKCRS------HGAP------------------------------ 580
Fly 581 -----------RWLEE--------------------------------NYFYQNVATGQHAACPS 602
Fly 603 ----GKINSKDANAGEQKGFRNDMDLLDSRRQSKDQEIIDNIDKNFEGPQISADI-INAQYTVET 662
Fly 663 LV-MAVLAGSI--FSLLVGFFTGYFCGRRCHKDEDDNLPYPDTEYEYFEQRQNVNSFPSSCRIQQ 724
Fly 725 EPKLLPQ---VEEVTYAEPVLLPQPPPPNKMHSPKNTLRKPPMH 765 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1a | NP_001260265.1 | Sema_1A | 91..546 | CDD:200498 | 155/528 (29%) |
PSI | 545..>579 | CDD:214655 | 15/46 (33%) | ||
Sema3f | XP_017168715.1 | Sema_3F | 48..548 | CDD:200515 | 153/521 (29%) |
PSI | 547..584 | CDD:214655 | 12/37 (32%) | ||
Ig | 609..>650 | CDD:386229 | 2/40 (5%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.910 |