DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sema1a and AgaP_AGAP006636

DIOPT Version :9

Sequence 1:NP_001260265.1 Gene:Sema1a / 34192 FlyBaseID:FBgn0011259 Length:1131 Species:Drosophila melanogaster
Sequence 2:XP_316667.4 Gene:AgaP_AGAP006636 / 1277222 VectorBaseID:AGAP006636 Length:679 Species:Anopheles gambiae


Alignment Length:683 Identity:230/683 - (33%)
Similarity:334/683 - (48%) Gaps:120/683 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 KDGNSLLIGARNTVFNLSIHDL----VEQQRLVWTSPEDDTKMCLVKGKDEE-ACQNYIRIMVVP 161
            :|.::|.:||.|.|:.|::.::    .|:..::......|.:.|:.:||.|. .|:|:||::...
Mosquito    41 EDRDTLYVGAMNRVYRLNLKNISMTSCEKDSMLLDPTGADIRNCVSRGKSEMFDCKNHIRVIQPM 105

  Fly   162 SPG-RLFVCGTNSFRP-----MCNTYIISDSNYTLEATKNGQAVCPYDPRHNSTSVLADN----- 215
            ..| ||::||||:..|     ..|...:..|.| :.....|.|.|||||..|||::....     
Mosquito   106 DNGTRLYICGTNAHSPKDVVIFRNLTHLPRSEY-VPGVGLGVAKCPYDPIDNSTAIYVHEGNPGG 169

  Fly   216 --ELYSGTVADFSGSDPIIYREPL-------------QTEQYDSLSLNAPNFVSSFTQGDFVYFF 265
              .|||||.|:|:.:|.:|:|..|             :|.:|||..|:.||||.||..|::||||
Mosquito   170 LPALYSGTNAEFTKADTVIFRADLYEMSSGKKMYNFKRTLKYDSKWLDKPNFVGSFDIGEYVYFF 234

  Fly   266 FRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQSASN 330
            |||.|||:||||||:|||||||||.|.||.:.....|.::||:||||||.|::||||||||..  
Mosquito   235 FREIAVEYINCGKAVYSRVARVCKKDTGGKNILNQNWATYLKARLNCSISGEFPFYFNEIQDV-- 297

  Fly   331 LVEGQYGSMSSKL-IYGVFNTPSNSIPGSAVCAFALQDIADTFEGQFKEQTGINSNWLPVNNAKV 394
                 |...:.|. .|..|.|.:|.:.|||||:|:|.:|...|.|:||||...||.||||.::|:
Mosquito   298 -----YQMPTDKTKFYATFTTSTNGLVGSAVCSFSLGEIHSAFAGKFKEQATSNSAWLPVMSSKI 357

  Fly   395 PDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPAFFSQPILVRTSTIYRFTQIAVDAQIKTPGG 459
            |:||||:|.:|:..|||..||||::|.|||..|...:..|:..:...|  .|::.||........
Mosquito   358 PEPRPGTCVDDTTTLPDAVLNFIRSHPLMDRAVTHDYGNPVFYKRDLI--LTKLVVDKITIDILN 420

  Fly   460 KTYDVIFVGTDHGKIIKSVN-AESADSADKVTSVVIEEIDVLTKSEPIRNLEIVRTMQYDQPKDG 523
            :.|.|.::.|:.|:|.|.|. .....|..|:..:    .|| ..:|||   :::|..|..:    
Mosquito   421 QEYLVYYLATNEGRIYKVVQYFHDGQSRAKLLDI----FDV-APNEPI---QVMRLSQRYK---- 473

  Fly   524 SYDDGKLIIVTDSQVVAIQLHRCHNDKITSCSECVALQDPYCAWDKIAGKCRSHGAPRWLEENYF 588
                 .|.|.|||::..|.|..| |.:..||..||  |||||.||:.:|.||.:       :..|
Mosquito   474 -----SLYIGTDSRIKQIDLVMC-NRRYDSCYRCV--QDPYCGWDRDSGSCRPY-------QLGF 523

  Fly   589 YQNVATGQHAACPSGKINSKDANAGEQK------------GFRNDMDLLDSR-----RQSKDQ-- 634
            .|:|.......|        |.|...:|            .|....::|..:     ..||::  
Mosquito   524 LQDVGNRTSDIC--------DTNVMRKKIIVTFGQSVHLGCFARVPEILKYQPVTWYHHSKERGR 580

  Fly   635 -EIIDNIDKNFEGPQISADIINAQYTVETLVMAVLAGSI---FSLLVGFFTGYFCGRRC---HKD 692
             |:..::.|:.|..:....:|.............|.||:   |||:|.       ..||   .|.
Mosquito   581 YEVRYSVTKHIETSEGGLVVIAINEADSGRYDCYLGGSLLCSFSLVVD-------AHRCTAPSKG 638

  Fly   693 EDDNLPYPDTEYEY---------FEQRQNVNSF 716
            .|....|.|..:|:         :|.:|:|..|
Mosquito   639 NDYQKIYSDWCHEFERYKSALKRWEAKQSVGFF 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sema1aNP_001260265.1 Sema_1A 91..546 CDD:200498 181/476 (38%)
PSI 545..>579 CDD:214655 16/33 (48%)
AgaP_AGAP006636XP_316667.4 Sema_2A 33..489 CDD:200499 180/474 (38%)
PSI 493..>516 CDD:279745 12/24 (50%)
Ig 542..630 CDD:299845 16/94 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3611
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D153798at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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