DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sema1a and AgaP_AGAP005742

DIOPT Version :9

Sequence 1:NP_001260265.1 Gene:Sema1a / 34192 FlyBaseID:FBgn0011259 Length:1131 Species:Drosophila melanogaster
Sequence 2:XP_001688723.1 Gene:AgaP_AGAP005742 / 1276412 VectorBaseID:AGAP005742 Length:769 Species:Anopheles gambiae


Alignment Length:657 Identity:283/657 - (43%)
Similarity:394/657 - (59%) Gaps:78/657 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 PKLYVELGPEDVLKFVGNESVVDHFKLVTKDGNSLLIGARNTVFNLSIHDLVE--QQRLVWTSPE 135
            ||:.: :|...|..|.||.:  |:|||:..:...:||||||.|:|:||..|||  .||:.|.|.:
Mosquito    14 PKIAI-VGNATVPSFFGNST--DYFKLLDANEQYILIGARNAVYNISIDRLVELPGQRISWPSSD 75

  Fly   136 DDTKMCLVKGKDEEACQNYIRIMVVPSPGRLFVCGTNSFRPMCNTYIISDSNYTLEATKN---GQ 197
            ...::|.:|||.|:.||||||:....:..|:.|||||||:|:|..|.:...|.:|....|   .|
Mosquito    76 AHRELCTLKGKHEQDCQNYIRVFARINANRIMVCGTNSFKPLCRYYNVLPGNGSLVYDNNELEAQ 140

  Fly   198 AVCPYDPRHNSTSVLADNELYSGTVADFSGSDPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFV 262
            ..|||:|:||||.|..|.:|||.|||||||:|.:|||||.:|||:||..||.|.|||:.....:|
Mosquito   141 GRCPYNPQHNSTYVYTDGQLYSATVADFSGADALIYREPQRTEQFDSKQLNQPAFVSAIEYNGYV 205

  Fly   263 YFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQS 327
            .||:||.|:|::||||||||||:||||.|||||:.|:::||||||:||||||||:|||||:|:|:
Mosquito   206 MFFYREVAMEYMNCGKAIYSRVSRVCKNDKGGPYPFQDKWTSFLKARLNCSIPGEYPFYFDELQA 270

  Fly   328 ASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIADTFEGQFKEQTGINSNWLPVNNA 392
            .:|.:.|.||.:.:|:|||:..||.|:|.|||||||:::||.:.|||.||.|..|:||||.|..:
Mosquito   271 TTNAISGTYGGVRNKIIYGIMTTPENAIGGSAVCAFSVEDIMEAFEGPFKAQRDIHSNWLQVPPS 335

  Fly   393 KVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPAFFSQPILVRTSTIYRFTQIAVDAQIKTP 457
            .||:||||.|.:|||.||...:||:||::|||.:||:..|:|:..|.|..||.:.||||.|:|..
Mosquito   336 AVPEPRPGKCVDDSRTLPKALVNFVKTNNLMDSSVPSVHSRPVFTRVSLYYRLSAIAVDPQVKAL 400

  Fly   458 GGKTYDVIFVGTDHGKIIKSVNAESADSADKVTSVVIEEIDVLTKSEPIRNLEIVRTMQYDQPKD 522
            .|:.||||||||:.||:||.||..||:::|.|.:|||.|.........|..:.|           
Mosquito   401 DGQRYDVIFVGTNDGKVIKFVNILSANTSDDVRTVVISETQAFPPGTKINEMTI----------- 454

  Fly   523 GSYDDGKLIIVTDSQVVAIQLHRCHNDKITSCSECVALQDPYCAWDKIAGKCR------SHGAPR 581
             |..:..||:::..:::::.||.|:.....:|.:|:.|||||||||.:...|:      :.||| 
Mosquito   455 -SKKNAALIVISSGKIISLPLHTCNEHSFKTCRKCLDLQDPYCAWDDLNRDCKPIDEVHASGAP- 517

  Fly   582 WLEENYFYQNVATGQHAACPSGKINSK--------------------DANAGEQKGFRNDMDLLD 626
               .:.|||.: .|:..    |:|..|                    |.:...:|..::    .|
Mosquito   518 ---IDQFYQRL-DGERI----GEICRKYDHQEPTVHTYEDNDVYTRVDGSGAVEKPDKS----FD 570

  Fly   627 SRR-----------QSKDQEIIDN--IDKNFEGPQISADIINA-QY--TVETLV-MAVLAG--SI 672
            .|.           .|...|.|||  ...:.||.:.:..|||. ||  ..:|.| ..||:.  ::
Mosquito   571 QRNVLIVHANHGTVSSVGPEDIDNEISMSSVEGDEQTNRIINTLQYQPKPDTFVKQNVLSATPNL 635

  Fly   673 FSLLVGF 679
            .|||:||
Mosquito   636 ISLLLGF 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sema1aNP_001260265.1 Sema_1A 91..546 CDD:200498 228/459 (50%)
PSI 545..>579 CDD:214655 13/39 (33%)
AgaP_AGAP005742XP_001688723.1 Sema_1A 29..477 CDD:200498 230/461 (50%)
PSI 480..>505 CDD:214655 11/24 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28691
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000892
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X415
TreeFam 00.000 Not matched by this tool.
43.920

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