Sequence 1: | NP_001260265.1 | Gene: | Sema1a / 34192 | FlyBaseID: | FBgn0011259 | Length: | 1131 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002935293.5 | Gene: | sema3d / 100492784 | XenbaseID: | XB-GENE-490694 | Length: | 776 | Species: | Xenopus tropicalis |
Alignment Length: | 683 | Identity: | 193/683 - (28%) |
---|---|---|---|
Similarity: | 325/683 - (47%) | Gaps: | 97/683 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 37 MKHKLSKFYGYGWMQ------VFLLLTVLVIGNQSAWQENIRPKLYVELGPEDVLKFVGN----- 90
Fly 91 -----ESVVDHFKLVTKDGNSLLIGARNTVFNLSIHDLVEQQRLV-WTSPEDDTKMCLVKGKDEE 149
Fly 150 -ACQNYIRIMVVPSPGRLFVCGTNSFRPMCNTYIISDSN----YTLEATKN---GQAVCPYDPRH 206
Fly 207 NSTSVLADNELYSGTVADFSGSDPIIYREP--------LQTEQYDSLSLNAPNFVSSFT------ 257
Fly 258 -QGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSRLNCSIP----GD 317
Fly 318 YPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIADTFEGQFKEQTGI 382
Fly 383 NSNWLPVNNAKVPDPRPGSCHN--------DSRALPDPTLNFIKTHSLMDENVPAFFSQPILVRT 439
Fly 440 STIYRFTQIAVDAQIKTPGGKTYDVIFVGTDHGKIIKSVNAESADSAD--KVTSVVIEEIDVLTK 502
Fly 503 SEPIRNLEIVRTMQYDQPKDGSYDDGKLIIVTDSQVVAIQLHRCHNDKITSCSECVALQDPYCAW 567
Fly 568 DKIAGKCRSHGAPRWLEENYFYQNVATGQH-AACPSGKINSKDANAGEQK--GFRNDMDLLDSRR 629
Fly 630 QSKDQEIIDNIDKNFEGPQ--ISAD--IINAQY 658 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1a | NP_001260265.1 | Sema_1A | 91..546 | CDD:200498 | 145/492 (29%) |
PSI | 545..>579 | CDD:214655 | 13/33 (39%) | ||
sema3d | XP_002935293.5 | Sema_3D | 60..533 | CDD:200513 | 145/497 (29%) |
PSI | 532..569 | CDD:214655 | 14/41 (34%) | ||
Ig_Sema3 | 594..685 | CDD:409455 | 15/54 (28%) | ||
Ig strand B | 608..612 | CDD:409455 | 1/3 (33%) | ||
Ig strand C | 620..624 | CDD:409455 | 1/3 (33%) | ||
Ig strand E | 647..651 | CDD:409455 | 1/1 (100%) | ||
Ig strand F | 661..666 | CDD:409455 | |||
Ig strand G | 678..681 | CDD:409455 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D153798at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.110 |