Protein Alignment Sema1a and sema5bb

DIOPT Version :9

• Sequence 1: NP_001260265.1
• Gene: Sema1a / 34192
• FlyBaseID: FBgn0011259
• Length: 1131
• Species: Drosophila melanogaster
• Sequence 2: XP_001340298.5
• Gene: sema5bb / 100000009
• ZFINID: ZDB-GENE-130530-778
• Length: 1098
• Species: Danio rerio
• Alignment Length: 572
• Identity: 211/572 - (36%)
• Similarity: 314/572 - (54%)
• Gaps: 82/572 - (14%)

  Fly    52 VFLLLTVLVIGNQS---------AWQENIRPKL-----YVELGPEDVLKFVGNESV--VDHFKLV 100
            :|.||.:.|:.:|:         ...|..|.|:     |..|.|     ::.:.||  |:.:..:
Zfish    18 IFHLLFLPVVTSQTPSSPPDTPDPQPEECRRKMHPVTSYTALSP-----WLFSFSVPGVNDYSPL 77

  Fly   101 TKD--GNSLLIGARNTVFNLSIHDLVEQQRLVWTSPEDDTKMCLVKGKDEEACQNYIRIMVVPSP 163
            |.|  .:.|::||||.:|.||:.::...|...|...|...:.|..|||.|:.||||:|:::: :.
Zfish    78 TLDLSRSQLIVGARNHLFRLSLSNISLLQATEWGVDETTRRSCQSKGKTEDECQNYVRVLLL-NG 141

  Fly   164 GRLFVCGTNSFRPMCNTYIISDSNYTLEATKNGQAVCPYDPRHNSTSVLADN-ELYSGTVADFSG 227
            .|||.||||:|.|:|.|..::|.:..|::. :|.|.||||||||||:::.:: |:|:.||.|||.
Zfish   142 SRLFTCGTNAFMPVCVTRPVTDISSVLDSI-SGVARCPYDPRHNSTAMITESGEVYAATVTDFSS 205

  Fly   228 SDPIIYRE-----PLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARV 287
            .||||||.     ||:|.||:|..||.|:|:|::....|.|.|.||.||| .:|||.::||||||
Zfish   206 RDPIIYRSLGNMPPLRTAQYNSKWLNDPHFISAYEVSRFTYVFLRENAVE-QDCGKTVFSRVARV 269

  Fly   288 CKWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPS 352
            |:.|.||.....:.||:|:|:|||||..||.|||::|:||...|.|       ..||||||.|..
Zfish   270 CQNDIGGRFLLEDTWTTFMKARLNCSRSGDVPFYYHELQSTFYLPE-------QDLIYGVFTTNV 327

  Fly   353 NSIPGSAVCAFALQDIADTFEGQFKEQTGINSNWL----PVNN---AKVPDPRPGSCHNDSRALP 410
            |||..||||||.|..|...|.|.|:.|....::||    ||.|   ..|.|..||: :...|:|.
Zfish   328 NSIAASAVCAFNLSAITQAFNGPFRYQENPRTSWLSTPNPVPNFQCGTVNDSGPGA-NLTERSLQ 391

  Fly   411 DPTLNFIKTHSLMDENVPAFFSQPILVRTSTIYRFTQIAVDAQIKTPGGKT-YDVIFVGTDHGKI 474
            |....|     ||.:.|....:.|::::.:  .||:::|||.   ..|..| |.|:::||::|.|
Zfish   392 DAQRLF-----LMSDVVQPISTDPLVMQDN--IRFSKLAVDI---VQGRDTLYHVMYIGTEYGTI 446

  Fly   475 IKSVNAESADSADKVTSVVIEEIDVL--TKSEPIRNLEIVRTMQYDQPKDGSYDDGKLIIVTDSQ 537
            ||:::..:    ..:....:||:::|  .|.|||.||:|:            :.|..|.:...|:
Zfish   447 IKALSTNN----KSLRGCYLEEMNILPGNKQEPILNLQIL------------HSDRSLFVGLPSR 495

  Fly   538 VVAIQLHRCHNDKITSCSECVALQDPYCAWDKIAGKCR----SHGAPRWLEE 585
            |:.|.|.||.| .||. .:|:..:||||.||:...:|.    |....:|.::
Zfish   496 VLKIPLERCSN-YITE-QDCLGARDPYCGWDRKEKRCTTIEDSSNMSQWSQD 545

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sema1a	NP_001260265.1	Sema_1A	91..546	CDD:200498	185/474 (39%)
		PSI	545..>579	CDD:214655	14/37 (38%)
sema5bb	XP_001340298.5	Sema	66..502	CDD:301699	184/472 (39%)
		PSI	503..550	CDD:279745	15/45 (33%)
		TSP1	561..613	CDD:214559
		TSP1	616..669	CDD:214559
		TSP1	674..719	CDD:214559
		TSP1	806..858	CDD:214559
		TSP1	869..915	CDD:214559
		TSP1	918..960	CDD:214559

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3611
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.810