DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sgp and FAR7

DIOPT Version :9

Sequence 1:NP_001260257.1 Gene:Sgp / 34188 FlyBaseID:FBgn0032055 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_197634.1 Gene:FAR7 / 832303 AraportID:AT5G22420 Length:409 Species:Arabidopsis thaliana


Alignment Length:481 Identity:110/481 - (22%)
Similarity:187/481 - (38%) Gaps:115/481 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQTDILQFYKDKSVFVTGGTGFLGKVIIEKLLR-STDVRRVYLLVRPKKNETVEGRFQAWKDEPV 64
            |:.:.:||.:::::.|||.:|||.||::|::|| ..:|:|:|||||....::.|.|:        
plant     1 MEPNCVQFLENRTILVTGASGFLAKVLVERILRLQPNVKRLYLLVRASDKKSAEQRY-------- 57

  Fly    65 FKILLKAKPEALKLVTPISGDCSEPGLGLSDGDRRMVTADVQVIIHSAASIRFVEPLQRALNINT 129
                                                   ||                  ||.|||
plant    58 ---------------------------------------DV------------------ALGINT 65

  Fly   130 RATRLMIQLAKEMKGLEAFVHISTAFSNCPSQ--HIEERFYPEHLTCPAAKVLEFN-ETLSPDLL 191
            .....::..||:....:..:|:||.:. |..:  ||.|:.:....:......::.| |....|..
plant    66 FGAINVLNFAKKCVKPKLLLHVSTVYV-CGERPGHIVEKHFAMGESLNGKNKVDINTERRLADQK 129

  Fly   192 DK--------------------MAPALMGKFPNTYTYTKALAEQVIQMEGQDLPICVFRPAIILA 236
            .|                    :..|.:..:||||.:|||:.|.::....:.:||.:.||.||.:
plant   130 SKQFKEQGCSEEETEQAMKDFGLKRARLYGWPNTYVFTKAMGEMLLGHYRETMPIVIIRPTIITS 194

  Fly   237 NFKEPMSGWIDNLHGV--VALIYGNTYGILRLLYVNPKADAIIVPGDYCANVALASGWQVAKNSE 299
            .|.:|..|||:.|..|  |.:.||.  |||:...|:.|....|:|.|...|..:|.......:|.
plant   195 TFSDPFPGWIEGLKTVDSVIIFYGK--GILKCFLVDQKTVCDIIPVDMVVNAMIAIAADHCHDSG 257

  Fly   300 SRSSSQLAAKKPPPIYTLATTKSNSITFGKAVKLGIHHNHTIP-VTK-TIWYPFAHFTTCPWLFK 362
            |.:...:.:....|:......:..|..|.|:..:|.:....:| ||: :....|..:|.      
plant   258 SHTVYHVGSSNQNPVIYKQIYEMMSRYFMKSPLVGRNGMLIVPKVTRISTLARFRVYTN------ 316

  Fly   363 LGCIFYHL---IPGFFFDLLLRIQGKKPILMRSYQKIHEVLLLLFP---FNGKTYEMDMNNTNQL 421
               :.|.|   |.|....:.|..:.|..:..|.::....::.|..|   |.|   ..|..|...|
plant   317 ---LRYKLPIQILGLLSVISLSQRDKFALHNRKFKMAMRLVKLYKPYVLFKG---IFDDKNMETL 375

  Fly   422 WDSMSPED-RSIFPFDMATLNWEEYF 446
            ......:| ..:|..:...::||:||
plant   376 RIKNEAKDMEKLFGTNPKCIDWEDYF 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgpNP_001260257.1 PLN02996 1..449 CDD:215538 110/481 (23%)
FAR-N_SDR_e 12..333 CDD:187547 81/346 (23%)
FAR_C 367..457 CDD:176924 20/87 (23%)
FAR7NP_197634.1 PLN02996 1..402 CDD:215538 110/481 (23%)
FAR-N_SDR_e 12..289 CDD:187547 81/344 (24%)
Sterile 319..402 CDD:281068 20/86 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D815047at2759
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X145
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.970

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