DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgp and CER4

DIOPT Version :9

Sequence 1:NP_001260257.1 Gene:Sgp / 34188 FlyBaseID:FBgn0032055 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_567936.5 Gene:CER4 / 829521 AraportID:AT4G33790 Length:493 Species:Arabidopsis thaliana


Alignment Length:522 Identity:135/522 - (25%)
Similarity:229/522 - (43%) Gaps:106/522 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ILQFYKDKSVFVTGGTGFLGKVIIEKLLR-STDVRRVYLLVRPKKNETVEGRFQAWKDE----PV 64
            :|::..:||:.|.|..|||..:.:||:|| :.:|:::|||:|..|.::...||   .||    .:
plant    10 VLKYLDNKSILVVGAAGFLANIFVEKILRVAPNVKKLYLLLRASKGKSATQRF---NDEILKKDL 71

  Fly    65 FKILL-KAKPEALKL----VTPISGDCSEPGLGLSDGD--RRMVTADVQVIIHSAASIRFVEPLQ 122
            ||:|. |..|...:|    :|.:.||.....|||.|.|  ..|: ..|..|::.||:.:|.|...
plant    72 FKVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFDLAHEMI-HQVDAIVNLAATTKFDERYD 135

  Fly   123 RALNINTRATRLMIQLAKEMKGLEAFVHISTAFSNC--PSQHIEERFY--PEHLTCPAAKVLEFN 183
            .||.|||.....::..||....::..||:|||:. |  .|..|.|..|  .|.|.......:.:.
plant   136 VALGINTLGALNVLNFAKRCAKVKILVHVSTAYV-CGEKSGLIMETPYRMGETLNGTTGLDINYE 199

  Fly   184 ETLSPDLLDKM-----AP--------------ALMGKFPNTYTYTKALAEQVIQMEGQDLPICVF 229
            :.|..:.||::     ||              |.|..:||||.:|||:.|.::..:.::|.:.:.
plant   200 KKLVQEKLDQLRVIGAAPETITETMKDLGLRRAKMYGWPNTYVFTKAMGEMMVGTKRENLSLVLL 264

  Fly   230 RPAIILANFKEPMSGWIDNLHGVVALIYGNTYGILRLLYVNPKADAIIVPGDYCANVALASGWQV 294
            ||:||.:.||||..||.:.:..:.:|..|...|.|.....:..|.:.::|.|...|..|.     
plant   265 RPSIITSTFKEPFPGWTEGIRTIDSLAVGYGKGKLTCFLCDLDAVSDVMPADMVVNSILV----- 324

  Fly   295 AKNSESRSSSQLAAKKPPPIYTLATTKSNSITFGKAVKLGIHHNHTIPVTKTIWYPFAHFTTCPW 359
                   |.:..|.|:...||.:.::..|.:...|..:|.                :.:|:..||
plant   325 -------SMAAQAGKQEEIIYHVGSSLRNPMKNSKFPELA----------------YRYFSIKPW 366

  Fly   360 ------LFKLGCI-FYHLIPGFFFDLLLRIQGKKPILMRSYQKIHEVLLLLFP-----FNGK--- 409
                  :.|:|.| ....:..|...:.:|..    |.::..:.::.:|..||.     ||.|   
plant   367 TNKEGKVVKVGAIEILSSMRSFHRYMTIRYL----IALKGLELVNIILCKLFEKEFQYFNKKINF 427

  Fly   410 ------TYE--------MDMNNTNQLWDSMSPE--DRSIFPFDMATLNWEEYF--TRILSGMRVF 456
                  .|:        .|.:||.:|...:|..  :..:|.||...|:|::||  |.:: |:..:
plant   428 IFRLVDLYQPYLFFYGIFDDSNTEKLRKMVSKTGVENEMFYFDPKVLDWDDYFLNTHVI-GLLKY 491

  Fly   457 LY 458
            ::
plant   492 VF 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgpNP_001260257.1 PLN02996 1..449 CDD:215538 134/511 (26%)
FAR-N_SDR_e 12..333 CDD:187547 103/355 (29%)
FAR_C 367..457 CDD:176924 24/115 (21%)
CER4NP_567936.5 PLN02996 6..493 CDD:215538 135/520 (26%)
FAR-N_SDR_e 17..365 CDD:187547 105/380 (28%)
Sterile 396..493 CDD:281068 22/101 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D815047at2759
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X145
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.970

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