DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgp and Far1

DIOPT Version :10

Sequence 1:NP_609241.1 Gene:Sgp / 34188 FlyBaseID:FBgn0032055 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_081655.2 Gene:Far1 / 67420 MGIID:1914670 Length:515 Species:Mus musculus


Alignment Length:509 Identity:166/509 - (32%)
Similarity:269/509 - (52%) Gaps:30/509 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ILQFYKDKSVFVTGGTGFLGKVIIEKLLRSTD-VRRVYLLVRPKKNETVEGRFQAWKDEPVFKIL 68
            |.::|:.|::.:||.|||||||::||||||.. |..||:|||.|..:|.:.|.:......:|..|
Mouse     4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSSKLFDRL 68

  Fly    69 LKAKPEALKLVTPISGDCSEPGLGLSDGDRRMVTADVQVIIHSAASIRFVEPLQRALNINTRATR 133
            ....|:..:.:..|:.:.::|.|.||:.|:.::.....||.|.||::||.|.|:.|:.:|..|||
Mouse    69 RDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQLNVIATR 133

  Fly   134 LMIQLAKEMKGLEAFVHISTAFSNCPSQHIEERFYPEHLTCPAAKVLEFNETLSPDLLDKMAPAL 198
            .:|.||::||.||.|:|:|||::.|..:||:|..||..:  ...|:::..|.:...|::.:.|.|
Mouse   134 QLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPV--DPKKLIDSLEWMDDGLVNDITPKL 196

  Fly   199 MGKFPNTYTYTKALAEQVIQMEGQDLPICVFRPAIILANFKEPMSGWIDNLHGVVALIYGNTYGI 263
            :|..||||.|||||||.|:|.||..|.:.:.||:|:.|::|||..|||||.:|...|......||
Mouse   197 IGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGI 261

  Fly   264 LRLLYVNPKADAIIVPGDYCANVALASGWQVAKNSESRSSSQLAAKKPPPI--YTLATTKSNSIT 326
            ||.:..:..|.|.:||.|...|.:||:.|....|            :|..|  |...|..:|...
Mouse   262 LRTMRASNNALADLVPVDVVVNTSLAAAWYSGVN------------RPRNIMVYNCTTGSTNPFH 314

  Fly   327 FGKAVKLGIHHNHTI------PVTKTIWYPFAHFTTCPWLFKLGCIFYHLIPGFFFDLLLRIQGK 385
            :|:.      ..|.|      |:.:....|..:.|:...|:.......|..|.|.:|:.||:.|:
Mouse   315 WGEV------EYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRMTGR 373

  Fly   386 KPILMRSYQKIHEVLLLLFPFNGKTYEMDMNNTNQLWDSMSPEDRSIFPFDMATLNWEEYFTRIL 450
            .|.:|::..::|:.::.|..|...::..:.:|.|.|.:.::|||:..|..|:..|:|.||.....
Mouse   374 SPRMMKTITRLHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYC 438

  Fly   451 SGMRVFLYKESWDTLEQAKKRLFRFYILHRSLQLVLCLALGKIVWILYSVIANN 504
            .|.:.::..|....|..|:|.|.:...:......:|.:.:.:| :|..|.:|.|
Mouse   439 MGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTILVILIWRI-FIARSQMARN 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgpNP_609241.1 FAR-N_SDR_e 12..333 CDD:187547 122/323 (38%)
Sterile 368..459 CDD:460779 25/90 (28%)
Far1NP_081655.2 FAR-N_SDR_e 11..330 CDD:187547 124/338 (37%)
Sterile 357..447 CDD:460779 25/89 (28%)
Necessary and sufficient for PEX19-mediated localization into peroxisome membrane. /evidence=ECO:0000250|UniProtKB:Q8WVX9 451..507 10/42 (24%)

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