DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgp and CG12268

DIOPT Version :9

Sequence 1:NP_001260257.1 Gene:Sgp / 34188 FlyBaseID:FBgn0032055 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_001247272.1 Gene:CG12268 / 42833 FlyBaseID:FBgn0039131 Length:531 Species:Drosophila melanogaster


Alignment Length:523 Identity:168/523 - (32%)
Similarity:281/523 - (53%) Gaps:34/523 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QTDILQFYKDKSVFVTGGTGFLGKVIIEKLLRS-TDVRRVYLLVRPKKNETVEGRFQAWKDEPVF 65
            ::||.:||.:|::.:||.|||:|||::|||||| .|:..:|||:|.||......|.:.:....:|
  Fly    12 ESDIAKFYANKTILITGATGFMGKVLVEKLLRSCADLNVIYLLIRTKKGVDPSVRKEQYFKCVIF 76

  Fly    66 KILLKAKPEALKLVTPISGDCSEPGLGLSDGDRRMVTADVQVIIHSAASIRFVEPLQRALNINTR 130
            ..||:..|..:..|..:.||..||.||||..|...:.::|:|:.|.||::||.:||:..:.:|..
  Fly    77 GKLLEKNPGIVDKVRVVKGDLLEPDLGLSANDTNTLASNVEVVFHCAANVRFDQPLRPMVMMNVV 141

  Fly   131 ATRLMIQLAKEMKGLEAFVHISTAFSNCPSQHIEERFYPEHLTCP--AAKVLEFNETLSPDLLDK 193
            .|..:::||::|..|:|.||:||::..|....:|||.||    .|  ...::|..||:..:.|.:
  Fly   142 GTLKVLRLAEKMSQLQALVHVSTSYCQCNESVLEERAYP----APQNPFSIIEMVETMDDEALAE 202

  Fly   194 MAPALMGKFPNTYTYTKALAEQVIQMEGQDLPICVFRPAIILANFKEPMSGWIDNLHGVVALIYG 258
            :.|.|:...||||.|:|||:|.:|......|||.:.||:|:.|...||:.|||:.::|...|:.|
  Fly   203 ITPKLLNGLPNTYAYSKALSEDLICRYNNKLPIIITRPSIVTAAIHEPLPGWIEGVNGPTGLMIG 267

  Fly   259 NTYGILRLLYVNPKADAIIVPGDYCANVALASGWQVAKNSESRSSSQLAAKKPPPIYTLATTKSN 323
            ...|::|.::.||...:.::|.|...|..:..|:|..|.|:.:.:.|...:    ...|..:...
  Fly   268 AARGVIRSMHCNPDYASTVIPVDKAINGMILCGYQRGKASQEKGNKQTGVE----FCNLCISSKA 328

  Fly   324 SITFGKAVKLGIHHNHTIPVTKTIWYP-------FAHFTTCPWLFKLGCIFYHLIPGFFFDLLLR 381
            .:::|.:::.|....:..|::..:|||       :.|...|       .||:|.:|.:|.|..|.
  Fly   329 LMSWGDSIETGRRFFYETPLSFALWYPGGSIKKNYYHHLFC-------VIFFHYLPAYFIDFWLL 386

  Fly   382 IQGKKPILMRSYQKIHEVLLLLFPFNGKTYEMDMNNTNQLWDSMSPEDRSIFPFDMATLNWEEYF 446
            :.|:||.|:...:|:...|.||..:..|.:|.......::...:|..|:.:|...:..:|||.|.
  Fly   387 VFGQKPFLLNVQRKVSMGLKLLQYYTTKRWEFRNERFQEMSSQLSLLDQDLFDTSVGQVNWETYI 451

  Fly   447 TRILSGMRVFLYKESWDTLEQAKKRLFRFYILHRSLQLVLCLALGKIVWILYSVI------ANNY 505
            :..:.|||.::..||.|||.||:|.|.|.|||. .:..||..:|.  .|.|::.:      ::.:
  Fly   452 SNYIVGMRTYILGESEDTLPQARKVLRRLYILD-WVSKVLFFSLS--FWFLWTHLDGFVERSDAF 513

  Fly   506 IRS 508
            |||
  Fly   514 IRS 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgpNP_001260257.1 PLN02996 1..449 CDD:215538 144/456 (32%)
FAR-N_SDR_e 12..333 CDD:187547 109/323 (34%)
FAR_C 367..457 CDD:176924 26/89 (29%)
CG12268NP_001247272.1 PLN02996 12..463 CDD:215538 147/465 (32%)
FAR-N_SDR_e 22..347 CDD:187547 110/332 (33%)
FAR_C 372..463 CDD:176924 26/90 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466772
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
109.900

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