DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgp and CG17560

DIOPT Version :9

Sequence 1:NP_001260257.1 Gene:Sgp / 34188 FlyBaseID:FBgn0032055 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_650567.1 Gene:CG17560 / 42022 FlyBaseID:FBgn0038450 Length:499 Species:Drosophila melanogaster


Alignment Length:503 Identity:248/503 - (49%)
Similarity:344/503 - (68%) Gaps:12/503 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQTDILQFYKDKSVFVTGGTGFLGKVIIEKLLRSTDVRRVYLLVRPKKNETVEGRFQAWKDEPVF 65
            |.::|..|:|:|:||:|||||||||||||||||:|:|.|:|.|:|||:...:|.|...|..:|||
  Fly     1 MDSEIQGFFKNKTVFLTGGTGFLGKVIIEKLLRTTEVNRIYSLIRPKRGVPIEDRITTWAKDPVF 65

  Fly    66 KILLKAKPEALKLVTPISGDCSEPGLGLSDGDRRMVTADVQVIIHSAASIRFVEPLQRALNINTR 130
            ::||:.||:||:.|.||:|||.:|.||:|..|:|::||:||::||.||::||.|.|..:|.||.|
  Fly    66 EVLLRTKPDALQRVCPIAGDCLDPDLGISQSDQRILTAEVQIVIHGAATVRFDEALHISLAINVR 130

  Fly   131 ATRLMIQLAKEMKGLEAFVHISTAFSNCPSQHIEERFYPEHLTCPAAKVLEFNETLSPDLLDKMA 195
            |||||:||||:|..|.:|||:|||:|||....|.||||||||.|.:.|:|...|.:|..|||.|.
  Fly   131 ATRLMLQLAKQMTQLVSFVHVSTAYSNCVVHDIAERFYPEHLNCSSDKILAVGELVSNKLLDAME 195

  Fly   196 PALMGKFPNTYTYTKALAEQVIQMEGQDLPICVFRPAIILANFKEPMSGWIDNLHGVVALIYGNT 260
            |:|:|.|||||||||||||.||..|..:||:.:||||||::.:|||:.||:|||.|.:||.:|..
  Fly   196 PSLVGSFPNTYTYTKALAEDVILREAGNLPLSIFRPAIIMSTYKEPLVGWVDNLFGPLALCFGGA 260

  Fly   261 YGILRLLYVNPKADAIIVPGDYCANVALASGWQVAKNSESRSSSQLAAKKPPPIYTLATTKSNSI 325
            .||:|:..|:|.|...:||.|||.|||||..|:.|:     .|.|......||||..|.:::|.:
  Fly   261 RGIMRVTTVDPSAKISLVPADYCVNVALACAWRTAE-----ISVQNGKVTTPPIYAFAPSENNLM 320

  Fly   326 TFGKAVKLGIHHNHTIPVTKTIWYPFAHFTTCPWLFKLGCIFYHLIPGFFFDLLLRIQGKKPILM 390
            ::|..:|..|.:...||:||.:||||....:...||.|...|.|.:||:|||||||::|:||||:
  Fly   321 SYGNFIKSSIIYRDIIPLTKMLWYPFVLCISTTSLFPLAAFFLHTLPGYFFDLLLRLKGRKPILV 385

  Fly   391 RSYQKIHEVLLLLFPFNGKTYEMDMNNTNQLWDSMSPEDRSIFPFDMATLNWEEYFTRILSGMRV 455
            ..|:|||:.:.:|.||:..|:..||.||.:|.::||.:||:::.||||.|:|.:||...:.|||:
  Fly   386 DLYRKIHKNIAVLGPFSSTTWNFDMTNTMELREAMSKQDRNLYDFDMAQLDWNDYFKAAMYGMRL 450

  Fly   456 FLYKESWDTLEQAKKRL---FRFYILHRSLQLVLCLALGKIVWILYSV 500
            ::.||. .|.|...|.|   .|..:||.:....|....|   :||||:
  Fly   451 YIGKEK-PTAESIAKGLKLRMRLKVLHYAFASSLVALAG---YILYSL 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgpNP_001260257.1 PLN02996 1..449 CDD:215538 230/447 (51%)
FAR-N_SDR_e 12..333 CDD:187547 172/320 (54%)
FAR_C 367..457 CDD:176924 44/89 (49%)
CG17560NP_650567.1 PLN02996 1..441 CDD:215538 228/444 (51%)
FAR-N_SDR_e 12..327 CDD:187547 172/319 (54%)
Sterile 364..454 CDD:281068 43/89 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466706
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG26995
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
1110.910

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