DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgp and CG17562

DIOPT Version :10

Sequence 1:NP_609241.1 Gene:Sgp / 34188 FlyBaseID:FBgn0032055 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_650566.1 Gene:CG17562 / 42021 FlyBaseID:FBgn0038449 Length:499 Species:Drosophila melanogaster


Alignment Length:503 Identity:259/503 - (51%)
Similarity:352/503 - (69%) Gaps:11/503 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQTDILQFYKDKSVFVTGGTGFLGKVIIEKLLRSTDVRRVYLLVRPKKNETVEGRFQAWKDEPVF 65
            |.|||.:.::.|:||:||.|||||||:||||||:|:|:|:|:|:|||:...::.|...|..:.||
  Fly     1 MDTDIQRCFRSKTVFLTGATGFLGKVVIEKLLRTTEVKRIYVLIRPKRGVEIKDRIITWSKDAVF 65

  Fly    66 KILLKAKPEALKLVTPISGDCSEPGLGLSDGDRRMVTADVQVIIHSAASIRFVEPLQRALNINTR 130
            ::|||:|||||:.|.||:|||.:..||:|:.|||::.::||::||.||::||.|||..||.||||
  Fly    66 ELLLKSKPEALQRVCPIAGDCLDFDLGISENDRRLLASEVQIVIHGAATVRFNEPLHVALAINTR 130

  Fly   131 ATRLMIQLAKEMKGLEAFVHISTAFSNCPSQHIEERFYPEHLTCPAAKVLEFNETLSPDLLDKMA 195
            ||:|||||||||:.||||||:|||||||...:|:|.||||||.|.:.|||...|.:|.:|||.|.
  Fly   131 ATKLMIQLAKEMRQLEAFVHVSTAFSNCVIYNIKENFYPEHLNCSSDKVLAMAELMSDELLDNME 195

  Fly   196 PALMGKFPNTYTYTKALAEQVIQMEGQDLPICVFRPAIILANFKEPMSGWIDNLHGVVALIYGNT 260
            .||:|.|||||||||||||.||..|...||:|:||||:|:|..|||:||||||::|.:|:::|..
  Fly   196 QALLGSFPNTYTYTKALAEDVILKEAGGLPLCIFRPAVIIAAHKEPISGWIDNMYGPMAILFGVA 260

  Fly   261 YGILRLLYVNPKADAIIVPGDYCANVALASGWQVAKNSESRSSSQLAAKKPPPIYTLATTKSNSI 325
            .|:||:..::..|:|.:||.|||||:.||..|:...     ..:::..::.|.||.||..:.|.|
  Fly   261 RGVLRIATIDHHAEASLVPVDYCANLTLACTWKTIV-----EGNEMGTQETPLIYQLAPIEQNKI 320

  Fly   326 TFGKAVKLGIHHNHTIPVTKTIWYPFAHFTTCPWLFKLGCIFYHLIPGFFFDLLLRIQGKKPILM 390
            |.|:.::..:......|:||.|||||.|..|.||||.|...|||.:|.:||||.|.:.|:||.|:
  Fly   321 THGEFIRHALDGRTNCPLTKMIWYPFIHCITVPWLFPLAAFFYHTLPAYFFDLALWLSGRKPRLV 385

  Fly   391 RSYQKIHEVLLLLFPFNGKTYEMDMNNTNQLWDSMSPEDRSIFPFDMATLNWEEYFTRILSGMRV 455
            :.|||||:.|.:|.||..|::..||.||:.|...||.|||.|:.|||.:|||:|||.:.|.|||.
  Fly   386 KVYQKIHKTLGILGPFACKSWRFDMRNTDHLRQQMSEEDRRIYYFDMVSLNWKEYFVQALRGMRQ 450

  Fly   456 FLYKE--SWDTLEQAKKRLFRFYILHRSLQLVLC----LALGKIVWIL 497
            ||..|  :.:::.|.||.:.|..:||..||.|||    |||..:|.||
  Fly   451 FLGNEAPTPESIAQGKKLIKRLKLLHHILQGVLCFVALLALWSLVRIL 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgpNP_609241.1 FAR-N_SDR_e 12..333 CDD:187547 173/320 (54%)
Sterile 368..459 CDD:460779 48/90 (53%)
CG17562NP_650566.1 FAR-N_SDR_e 12..329 CDD:187547 173/321 (54%)
Sterile 363..452 CDD:460779 46/88 (52%)

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