DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sgp and CG10096

DIOPT Version :9

Sequence 1:NP_001260257.1 Gene:Sgp / 34188 FlyBaseID:FBgn0032055 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_001027183.1 Gene:CG10096 / 3772183 FlyBaseID:FBgn0038032 Length:502 Species:Drosophila melanogaster


Alignment Length:512 Identity:263/512 - (51%)
Similarity:362/512 - (70%) Gaps:16/512 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQTDILQFYKDKSVFVTGGTGFLGKVIIEKLLRSTDVRRVYLLVRPKKNETVEGRFQAWKDEPVF 65
            |.||:..|||||:||:|||:||||||.|.|||.:|:|:|:|:|:|.|:.:.:..|..||..:|||
  Fly     1 MATDVQSFYKDKTVFLTGGSGFLGKVTIAKLLCTTEVKRIYVLLRAKRGQEMRERCAAWDKDPVF 65

  Fly    66 KILLKAKPEALKLVTPISGDCSEPGLGLSDGDRRMVTADVQVIIHSAASIRFVEPLQRALNINTR 130
            ..|:|..|||||.|.|..|||.||.||||:.||:::..:||::||:||::||||||..||.:|||
  Fly    66 GNLMKTNPEALKRVVPCGGDCQEPDLGLSNSDRQVLIDEVQIVIHTAATVRFVEPLHIALAVNTR 130

  Fly   131 ATRLMIQLAKEMKGLEAFVHISTAFSNCPSQHIEERFYPEHLTCPAAKVLEFNETLSPDLLDKMA 195
            ||||||||||||..||:|||:|||:|||..:|:.||||||||||||.|:||..|::||:||||||
  Fly   131 ATRLMIQLAKEMSHLESFVHVSTAYSNCVVEHVSERFYPEHLTCPAEKILELLESISPELLDKMA 195

  Fly   196 PALMGKFPNTYTYTKALAEQVIQMEGQDLPICVFRPAIILANFKEPMSGWIDNLHGVVALIYGNT 260
            ||||||:||||||||||.|||||.|.:|||:.:|||.:|:|::||||.||||||:|.:|::||..
  Fly   196 PALMGKYPNTYTYTKALTEQVIQKEAKDLPLSIFRPGVIIASYKEPMPGWIDNLYGPIAVLYGAA 260

  Fly   261 YGILRLLYVNPKADAIIVPGDYCANVALASGWQVAKNSESRSSSQLAAKKPPPIYTLATTKSNSI 325
            :|||.:..:|.||.|.|||.|||.|:.|...|..|:::..:.|.:      ||||.......|.|
  Fly   261 FGILHITLLNLKAQAGIVPVDYCVNMVLTCAWNTARDTSIKLSPE------PPIYNFTPNNDNLI 319

  Fly   326 TFG----KAVKLGIHHNHTIPVTKTIWYPFAHFTTCPWLFKLGCIFYHLIPGFFFDLLLRIQGKK 386
            |:|    ||.:|    .:|.|:||.:|.||.|.||.||||:...|||||:||:..||.||:.|||
  Fly   320 TWGGFRDKAARL----RYTYPLTKMMWLPFLHCTTIPWLFRFTAIFYHLLPGYAIDLALRLWGKK 380

  Fly   387 PILMRSYQKIHEVLLLLFPFNGKTYEMDMNNTNQLWDSMSPEDRSIFPFDMATLNWEEYFTRILS 451
            |.:::.|.|||:.:.:|.||...::..|..||.:||..||.||:.::.|:|::::|::||.:.|:
  Fly   381 PRMIKLYDKIHKNIDILAPFVITSWSFDTVNTRKLWAKMSVEDQKLYDFNMSSVDWDDYFLQALA 445

  Fly   452 GMRVFLYKE--SWDTLEQAKKRLFRFYILHRSLQLVLCLALGKIVWILYSVIANNYI 506
            |:|::|.||  ..:.:|:.:|...||..|||.||..||.....|:|.:...:..:::
  Fly   446 GVRIYLAKEEPGQEVVERGRKIYKRFEFLHRLLQFTLCGGAALILWSILKRLLGSFV 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgpNP_001260257.1 PLN02996 1..449 CDD:215538 244/451 (54%)
FAR-N_SDR_e 12..333 CDD:187547 186/324 (57%)
FAR_C 367..457 CDD:176924 38/89 (43%)
CG10096NP_001027183.1 PLN02996 1..441 CDD:215538 243/449 (54%)
FAR-N_SDR_e 12..330 CDD:187547 186/323 (58%)
Sterile 363..453 CDD:281068 37/89 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466703
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
98.890

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