DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sgp and CG8303

DIOPT Version :9

Sequence 1:NP_001260257.1 Gene:Sgp / 34188 FlyBaseID:FBgn0032055 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_001286495.1 Gene:CG8303 / 36858 FlyBaseID:FBgn0034143 Length:543 Species:Drosophila melanogaster


Alignment Length:530 Identity:155/530 - (29%)
Similarity:245/530 - (46%) Gaps:63/530 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ILQFYKDKSVFVTGGTGFLGKVIIEKLLRS-TDVRRVYLLVRPKKNETVEGRFQAWKDEPVFKIL 68
            |.:|:..|::||||||||||.|:||.||.: .|:..:|:|||.|:......|.:....:|:|:  
  Fly    39 IPEFFAHKNIFVTGGTGFLGTVLIEALLDTHPDIGTIYVLVRGKRKFDPNERIRRLLQKPIFE-- 101

  Fly    69 LKAKPEALKLVTPISGDCSEPGLGLSDGDRRMVTADVQVIIHSAASIRFVEPLQRALNINTRATR 133
             |...:.|..|.|:.|:.|||..|......:.:...|.||.||||:|:|..||:.|:..|...|.
  Fly   102 -KYSEKTLSKVVPVVGELSEPNFGFGPELLQELIDRVNVIYHSAATIKFSSPLRTAIRTNLTGTM 165

  Fly   134 LMIQLAKEMKGLEAFVHISTAFSNCPSQHI--EERFYPEHLTCPAAKVLEFNETLSPDLLDKMAP 196
            ..|:|||::|.|.|:::.||||.|..::.:  ||.:..:.......|:.| :::...|..|:...
  Fly   166 RTIELAKQLKQLAAYIYCSTAFCNSNNRGLIAEEVYKSQFDPYEMMKMAE-DDSAWEDFTDQKCK 229

  Fly   197 ALMGKFPNTYTYTKALAEQVIQMEGQDLPICVFRPAIILANFKEPMSGWIDNLH-GVVALIYGNT 260
            ..:...|||||:||.|:|.::..|...||..:.||:|:....:.||.||:.|.: |.:..:.|..
  Fly   230 GYIRDHPNTYTFTKNLSENLLMAEMSGLPAAIVRPSIVYGTLEHPMKGWVGNANSGHLGFLAGFV 294

  Fly   261 YGILRLLYVNPKADAIIVPGDYCANVALASGWQVAKNSESRSSSQLAAKKPPPIYTLATTKSNSI 325
            .||.|.:..|..|...|:|.||..|.:|..||.|....         .::|..|:         .
  Fly   295 KGIFRTMCGNANAVIDIIPCDYVINSSLVMGWYVGTRK---------LEQPEIIH---------C 341

  Fly   326 TFGKAVKLGIHHNHTI--------PVTKTIWYPFAHFTTCPWLFKLGCIFYHLIPGFFF---DLL 379
            |.|:...|.:....||        |....:|.|...... .|.:.|....:||:|...|   :.|
  Fly   342 TSGEVNPLNLAEFCTIINDSVERHPPNSFVWKPVTKLRN-GWRYNLFFYLFHLLPAMVFIIPEKL 405

  Fly   380 LRIQGKKPILMRSYQKIHEVLLLLFP-FNGKTYEMDMNNTNQLWDSMSPE-DRSIFPFDMATLNW 442
            ..| |........|.::.:.....|. |..|.:...:.|..:: .::.|| ||..:.||.:..:|
  Fly   406 FGI-GMPQHTAYEYMRVFQKGTKAFDYFLDKDFRYSLKNALRI-SALIPESDRRRYNFDASQCDW 468

  Fly   443 EEYFTRILSGMRVFLYKESWDTLEQAKK--RLFR----------FYILHRSLQLVLCLALGK--- 492
            .|:..|.|.|:|.|.:|||..|.:..:.  ::|.          |.:|:.:|.|.|.|.:|.   
  Fly   469 SEFIDRCLIGIRRFYFKESAVTTDWHRNYWKVFNVLYYAGYVVIFAVLYFALTLTLGLQIGLTLA 533

  Fly   493 ------IVWI 496
                  :||:
  Fly   534 VLIWGFLVWL 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgpNP_001260257.1 PLN02996 1..449 CDD:215538 136/460 (30%)
FAR-N_SDR_e 12..333 CDD:187547 106/324 (33%)
FAR_C 367..457 CDD:176924 24/94 (26%)
CG8303NP_001286495.1 FAR-N_SDR_e 46..366 CDD:187547 109/341 (32%)
Sterile 392..485 CDD:281068 25/94 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466799
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
88.000

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