DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uba4 and mocs3

DIOPT Version :9

Sequence 1:NP_001260255.1 Gene:Uba4 / 34187 FlyBaseID:FBgn0032054 Length:453 Species:Drosophila melanogaster
Sequence 2:NP_956421.1 Gene:mocs3 / 393095 ZFINID:ZDB-GENE-040426-782 Length:459 Species:Danio rerio


Alignment Length:473 Identity:227/473 - (47%)
Similarity:307/473 - (64%) Gaps:35/473 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MESEVDSERTML---KREIAELRAALNQKEQCLRELDSLFSFATRPE-QEVVGNDLESPDVAVHT 62
            |:..:.|.::.|   :||:|.|:..|:|.|:         ..:|.|| ||.|.:  .|| :.::|
Zfish     1 MDDTIVSLKSQLLEREREVATLKKKLDQIEK---------GNSTLPELQEKVTS--LSP-LRLNT 53

  Fly    63 KLTNDDIARYSRQLILPDFGVQGQLKLKNSSVLIVGLGGLGCPAAQYLAAAGCGHLGLVDYDEVE 127
            .|.||||.||||||:||:.||:||:.:.|.|||:||.||||||.||||||||.|.|||:|||.||
Zfish    54 SLNNDDIMRYSRQLLLPELGVKGQIAISNISVLVVGCGGLGCPLAQYLAAAGIGRLGLLDYDVVE 118

  Fly   128 RSNFHRQILHSEDRCGMSKAESARIALLELNPHCEIQC--HSRMLYPHNAMHIIRGYDVVLDCTD 190
            .||.|||:||:|...|..||.||..|:..:|  ..:||  :...|...||:.:|:.||:|.||:|
Zfish   119 LSNLHRQVLHTELTQGQPKALSAAQAISRMN--STVQCVPYHLQLSRENAIQLIQQYDIVADCSD 181

  Fly   191 NVPTRYLLSDACVMLSKPLVSGSALKMDGQLTVYNYANGPCYRCIFPVPPPPEAVTNCGDGGVLG 255
            |||||||::||||:.|:||||.|||:|:||||||||..||||||::|:|||||.||||.||||||
Zfish   182 NVPTRYLVNDACVLTSRPLVSASALRMEGQLTVYNYRGGPCYRCLYPIPPPPETVTNCSDGGVLG 246

  Fly   256 AVTGTIGAMQALEAIKVIVGMGDVLAGRLLIFDGGSGVFRNIRIRSKRPNCHMCSAQPLITELIN 320
            .|.|.:|.:||||.:|:..|.....|.:||:|||....||:||:||::..|.:|..:|.||||.:
Zfish   247 VVPGIMGCLQALEVLKIASGQECSFAQQLLMFDGEQTRFRSIRLRSRQKECVVCGEKPTITELQD 311

  Fly   321 YEMFCGMHATDKNNPMLLLSTDERLSVEDYQQKI-QAQPHLLIDVRPTAEFEICQLPEAVNVPLV 384
            ||.|||..||||...:.|||.::|:||:||:..: .:.||||:||||..|.:||:|..::::||.
Zfish   312 YEHFCGSAATDKCRRLHLLSREQRVSVQDYKGILDHSTPHLLLDVRPKVEVDICRLSNSLHIPLA 376

  Fly   385 EILDD-----SYLKRLGKQLED-----KELPIVLVCRRGNDSQIAVQHLRN----RFPTHFVRDL 435
            .:.|.     :.||.....|::     ..:.:.:||:.|||||.|||.|..    ......|:|:
Zfish   377 SLEDKKPEHITLLKEAISDLQEHLNNQSPVQVFVVCKLGNDSQKAVQLLEKMSGAEVEAMTVKDI 441

  Fly   436 IGGLHAWTNSVDPSFPIY 453
            .|||.||...:|..||.|
Zfish   442 GGGLMAWAKKIDYCFPQY 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba4NP_001260255.1 PRK07878 56..453 CDD:181156 209/413 (51%)
ThiF_MoeB_HesA_family 71..299 CDD:238386 136/229 (59%)
RHOD_ThiF 336..453 CDD:238784 47/131 (36%)
mocs3NP_956421.1 PRK07411 46..459 CDD:180967 210/415 (51%)
ThiF_MoeB_HesA_family 62..290 CDD:238386 136/229 (59%)
RHOD_ThiF 327..459 CDD:238784 47/131 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596030
Domainoid 1 1.000 288 1.000 Domainoid score I1540
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6108
Inparanoid 1 1.050 408 1.000 Inparanoid score I1857
OMA 1 1.010 - - QHG53534
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003489
OrthoInspector 1 1.000 - - oto41372
orthoMCL 1 0.900 - - OOG6_100543
Panther 1 1.100 - - LDO PTHR10953
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1579
SonicParanoid 1 1.000 - - X2381
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.790

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