DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uba4 and Uba7

DIOPT Version :10

Sequence 1:NP_609240.2 Gene:Uba4 / 34187 FlyBaseID:FBgn0032054 Length:453 Species:Drosophila melanogaster
Sequence 2:NP_001380849.1 Gene:Uba7 / 301000 RGDID:1308323 Length:990 Species:Rattus norvegicus


Alignment Length:464 Identity:103/464 - (22%)
Similarity:155/464 - (33%) Gaps:117/464 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 PEQEVVGNDLESPDVAVHTKLTNDDIARYSRQLILPDFGVQGQLKLKNSSVLIVGLGGLGCPAAQ 108
            ||.|.:   |.||: ..|.:     ..||..|:.:...|.|.:|..|: .:|.||.|.:||...:
  Rat   383 PEDETL---LPSPE-DCHPR-----NCRYDGQIAVFGTGFQEKLSYKH-YLLQVGAGAIGCEMLK 437

  Fly   109 YLAAAGC-----GHLGLVDYDEVERSNFHRQILHSEDRCGMSKAESARIALLELNPHCEIQCHSR 168
            ..|..|.     |.:.:.|.|.|||||..||.|......|..|||.|..|...|||..::..|:.
  Rat   438 GFALVGLGVRDNGGVTIADMDHVERSNLSRQFLFRPKDTGRPKAEVAAEAAHRLNPDLQVTSHTC 502

  Fly   169 MLYPHNA----MHIIRGYDVVLDCTDNVPTRYLLSDACVMLSKPLVSGSALKMDGQLTVYNYANG 229
            .|.|...    .......|.|:...|:...|:.::..|....|||:........|..:|:     
  Rat   503 PLDPTTEDIYDDDFFSRVDGVVAALDSFQARHYVAARCTHYLKPLLEAGTQGTRGSASVF----- 562

  Fly   230 PCYRCIFPVPPPPEAVTNCGDGGVLGAVTGTIGAMQALEAIKVIVGMGDVLAGRL-LIFDGGSGV 293
                    ||...|            ...|...|.:|...:..:......:...| ...|...|:
  Rat   563 --------VPYVTE------------VYKGPTSAEEAPYPVCTLRHFPSTVEHSLQWAQDEFEGL 607

  Fly   294 FRNIRIRSKRPNCHMCSAQPLITELIN-YEMFC--GMHATDKNNPMLLLSTDERLSVEDYQQKIQ 355
            ||                  |..|.|| |:..|  .:..||....:.||        :.....::
  Rat   608 FR------------------LSAETINDYQQTCTSSLLGTDGTGILALL--------QQVMGVLR 646

  Fly   356 AQPHLLID--VRPTAEFEICQLPEAVNV----PLVEILDDSYLKRLGKQL----------EDKEL 404
            .:|....|  |.....:::|.....|.:    |..::|:|..|...|.:.          :|...
  Rat   647 TRPQTWQDCVVWALGHWQLCFRDNIVELLRKFPSDKVLEDGTLFWSGSKKCPHPLQFDPNQDTHF 711

  Fly   405 PIVLVCRR---------GNDSQIAVQHL-------------RNRFPTHF----VRDLIGGLHAWT 443
            ..||....         |:.||.|::.|             :|.|...|    :::|...|..| 
  Rat   712 LYVLAAANLYARMHGLPGSQSQTALRELLTLTLLQEPDSMPQNLFSAEFGQEQLKELQETLDDW- 775

  Fly   444 NSVDPSFPI 452
            |...|..|:
  Rat   776 NKGPPLKPV 784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba4NP_609240.2 ThiF 65..311 CDD:440244 59/255 (23%)
RHOD_ThiF 336..453 CDD:238784 29/159 (18%)
Uba7NP_001380849.1 Ube1 1..988 CDD:273603 103/464 (22%)

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