DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uba4 and Uba5

DIOPT Version :9

Sequence 1:NP_001260255.1 Gene:Uba4 / 34187 FlyBaseID:FBgn0032054 Length:453 Species:Drosophila melanogaster
Sequence 2:NP_001009669.1 Gene:Uba5 / 300968 RGDID:1311702 Length:403 Species:Rattus norvegicus


Alignment Length:424 Identity:97/424 - (22%)
Similarity:158/424 - (37%) Gaps:100/424 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EQCLRELDSLFSFATRPEQEVVGNDLESPDVAVHTKLTND--DIARYSRQLILPDFGVQGQL-KL 89
            |:.|:.::.|.....|.....:..|.......:. |::::  |...|||.:.|...||.... |:
  Rat     6 ERLLQRVEELEQELARERSRRIAGDGHCGRTRIQ-KMSDEVVDSNPYSRLMALKRMGVVSDYEKI 69

  Fly    90 KNSSVLIVGLGGLGCPAAQYLAAAGCGHLGLVDYDEVERSNFHRQILHSEDRCGMSKAESARIAL 154
            :..:|.|||:||:|...|:.|...|.|.|.|.|||:||.:|.:| :.....:.||||.::|...|
  Rat    70 RTYAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNR-LFFQPYQAGMSKVQAAEHTL 133

  Fly   155 LELNPHCEIQCHSRML-----YPHNAMHIIRG-------YDVVLDCTDNVPTRYLLSDACVMLSK 207
            ..:||....:.|:..:     :.|....|..|       .|:||.|.||...|..::.||..|.:
  Rat   134 RSINPDVLFEVHNYNITTVEHFEHFMNRISNGGLEEGQPVDLVLSCVDNFEARMAINTACNELGQ 198

  Fly   208 P-LVSG-SALKMDGQLTVYNYANGPCYRCIFPVPPPPEAVTNCGD-----GGVLGA----VTGTI 261
            . :.|| |...:.|.:.:.......|:.|    .||....:|..:     .||..|    ..|.:
  Rat   199 TWMESGVSENAVSGHIQLMVPGESACFAC----APPLVVASNIDEKTLKREGVCAASLPTTMGVV 259

  Fly   262 GAMQALEAIKVIVGMGDVLAGRLLIFDGGSGVFRNIRIRSKRPNCHMCSAQPLITELINYEMFCG 326
            ..:.....:|.::..|.|  ...|.::.....|..:.:: ..|.|                    
  Rat   260 AGILVQNVLKFLLKFGTV--SFYLGYNAMQDFFPTMFMK-PNPQC-------------------- 301

  Fly   327 MHATDKNNPMLLLSTDERLSVEDYQQKIQAQPHLLIDVRPTAEFEICQLPEAVNVPLVEILDDSY 391
               .|||.         |...|:|:::..|||  ..:..|..|.|:..                 
  Rat   302 ---DDKNC---------RKQQEEYKKRAPAQP--TQETAPQEEEEVVH----------------- 335

  Fly   392 LKRLGKQLEDKELPIVLVCRRGNDSQIAVQHLRN 425
                    ||.|..|.||      |:::.:.|:|
  Rat   336 --------EDNEWGIELV------SEVSEEELKN 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba4NP_001260255.1 PRK07878 56..453 CDD:181156 92/396 (23%)
ThiF_MoeB_HesA_family 71..299 CDD:238386 67/251 (27%)
RHOD_ThiF 336..453 CDD:238784 18/90 (20%)
Uba5NP_001009669.1 ThiF_MoeB_HesA_family 50..293 CDD:238386 67/249 (27%)
ThiF 51..307 CDD:279270 72/295 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 306..337 9/66 (14%)
UFM1-interacting sequence (UIS). /evidence=ECO:0000250|UniProtKB:Q9GZZ9 333..345 4/36 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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