DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uba4 and uba-2

DIOPT Version :9

Sequence 1:NP_001260255.1 Gene:Uba4 / 34187 FlyBaseID:FBgn0032054 Length:453 Species:Drosophila melanogaster
Sequence 2:NP_001293154.1 Gene:uba-2 / 24104970 WormBaseID:WBGene00006700 Length:582 Species:Caenorhabditis elegans


Alignment Length:149 Identity:42/149 - (28%)
Similarity:73/149 - (48%) Gaps:1/149 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 KLKNSSVLIVGLGGLGCPAAQYLAAAGCGHLGLVDYDEVERSNFHRQILHSEDRCGMSKAESARI 152
            |:..|.:|::|.||:||...:.||..|...:.::|.|.::.||.:||.|..::....|||.:|..
 Worm    10 KIVQSKILVIGAGGIGCELLKNLAVTGFRKVHVIDLDTIDISNLNRQFLFRKEHVSSSKAATATQ 74

  Fly   153 ALLELNPHCEIQC-HSRMLYPHNAMHIIRGYDVVLDCTDNVPTRYLLSDACVMLSKPLVSGSALK 216
            .:.:..|..|:.. |..:......|...:.||:||:..||...|..::..|...::||:...:..
 Worm    75 VVKQFCPQIELTFDHDSIFEKKYNMEFFQAYDIVLNALDNRAARNYVNRMCHAANRPLIDSGSGG 139

  Fly   217 MDGQLTVYNYANGPCYRCI 235
            ..||::|.......||.|:
 Worm   140 YFGQVSVIMRGKTECYECV 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba4NP_001260255.1 PRK07878 56..453 CDD:181156 42/149 (28%)
ThiF_MoeB_HesA_family 71..299 CDD:238386 42/149 (28%)
RHOD_ThiF 336..453 CDD:238784
uba-2NP_001293154.1 ThiF 9..>172 CDD:279270 42/149 (28%)
E1_enzyme_family 15..434 CDD:304554 40/144 (28%)
UAE_UbL 442..526 CDD:291402
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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