DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and PEP4

DIOPT Version :10

Sequence 1:NP_609235.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_015171.1 Gene:PEP4 / 855949 SGDID:S000006075 Length:405 Species:Saccharomyces cerevisiae


Alignment Length:404 Identity:162/404 - (40%)
Similarity:231/404 - (57%) Gaps:50/404 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IAVVVLLAALASAELHRVPILK-----EQNFVKTRQNVLAEKSYLRTKYQLPSLRSVDEE----- 59
            :|::::.|...:|::|:..|.|     |...|...|::    ::|..|| |......:.|     
Yeast    10 LALLLVSANQVAAKVHKAKIYKHELSDEMKEVTFEQHL----AHLGQKY-LTQFEKANPEVVFSR 69

  Fly    60 ------------QLSNSMNMAYYGAISIGTPAQSFKVLFDSGSSNLWVPSNTCKSDACLTHNQYD 112
                        .|:|.:|..||..|::|||.|:|||:.|:||||||||||.|.|.||..|::||
Yeast    70 EHPFFTEGGHDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYD 134

  Fly   113 SSASSTYVANGESFSIQYGTGSLTGYLSTDTVDVNGLSIQSQTFAESTNEPGTNFNDANFDGILG 177
            ..|||:|.|||..|:||||||||.||:|.||:.:..|:|..|.|||:|:|||..|....||||||
Yeast   135 HEASSSYKANGTEFAIQYGTGSLEGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILG 199

  Fly   178 MAYESLAVDGVAPPFYNMVSQGLVDNSVFSFYLARDGTST-MGGELIFGGSDASLYSGALTYVPI 241
            :.|::::||.|.|||||.:.|.|:|...|:|||......| .|||..|||.|.|.:.|.:|::|:
Yeast   200 LGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPV 264

  Fly   242 SEQGYWQFTMAGSSI-DGYSLCDDCQAIADTGTSLIVAPYNAYITLSEILNV---GEDGY----- 297
            ..:.||:....|..: |.|:..:...|..|||||||..|..    |:|::|.   .:.|:     
Yeast   265 RRKAYWEVKFEGIGLGDEYAELESHGAAIDTGTSLITLPSG----LAEMINAEIGAKKGWTGQYT 325

  Fly   298 LDCSSVSSLPDVTFNIGGTNFVLKPSAYIIQSDGNCMSAFEYMGTDF-------WILGDVFIGQY 355
            |||::..:|||:.||..|.||.:.|..|.::..|:|:||...|  ||       .|:||.|:.:|
Yeast   326 LDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVSGSCISAITPM--DFPEPVGPLAIVGDAFLRKY 388

  Fly   356 YTEFDLGNNRIGFA 369
            |:.:|||||.:|.|
Yeast   389 YSIYDLGNNAVGLA 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_609235.1 pepsin_retropepsin_like 59..369 CDD:472175 148/343 (43%)
PEP4NP_015171.1 Proteinase_A_fungi 81..403 CDD:133155 148/328 (45%)

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