DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bace and BAR1

DIOPT Version :9

Sequence 1:NP_001285756.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_012249.1 Gene:BAR1 / 854797 SGDID:S000001277 Length:587 Species:Saccharomyces cerevisiae


Alignment Length:382 Identity:103/382 - (26%)
Similarity:159/382 - (41%) Gaps:98/382 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 LSNSMNMAYYGAISIGTPAQSFKVLFDSGSSNLWV----------------------------PS 97
            |.:...|.|...:.||||:||..||||:||::.||                            ||
Yeast    37 LQHEEEMYYATTLDIGTPSQSLTVLFDTGSADFWVMDSSNPFCLPNSNTSSYSNATYNGEEVKPS 101

  Fly    98 NTCKSDACLTHNQYDSSASSTYVANGESFSIQYGTGSLT-GYLSTDTVDVNGLSIQSQTFAESTN 161
            ..|:|.:  |:|::.|| :..|:.||. |.|.|..|:.. |...|:||.:||:.|          
Yeast   102 IDCRSMS--TYNEHRSS-TYQYLENGR-FYITYADGTFADGSWGTETVSINGIDI---------- 152

  Fly   162 EPGTNFNDANF-----DGILGMAY---ESL-AVDGVAPPFYN-----MVSQGLVDNSVFSFYLAR 212
             |...|..|.:     .|:||:.:   ||: ..:|....:|.     :.|:.::|...:|.:|..
Yeast   153 -PNIQFGVAKYATTPVSGVLGIGFPRRESVKGYEGAPNEYYPNFPQILKSEKIIDVVAYSLFLNS 216

  Fly   213 DGTSTMGGELIFGGSDASLYSGALTYVP--------ISEQGYWQFTMAGSSIDGYSLCD------ 263
            ..:.|  |.::||..|.|.:||.|...|        :........|:.|......|.|:      
Yeast   217 PDSGT--GSIVFGAIDESKFSGDLFTFPMVNEYPTIVDAPATLAMTIQGLGAQNKSSCEHETFTT 279

  Fly   264 -DCQAIADTGTSLIVAPYNAYITLSEILNVG---EDG--YLDCSSVSSLPDVTFN--IGGTNFVL 320
             ....:.|:||||:.||......::..:|..   |:|  .|||.  .|:.||.:|  .|.....:
Yeast   280 TKYPVLLDSGTSLLNAPKVIADKMASFVNASYSEEEGIYILDCP--VSVGDVEYNFDFGDLQISV 342

  Fly   321 KPSAYII--QSDGNCMSAFEYMG------TDFWILGDVFIGQYYTEFDLGNNRIGFA 369
            ..|:.|:  :::|:      |.|      .|..:|||||:...|..|||.|.:|..|
Yeast   343 PLSSLILSPETEGS------YCGFAVQPTNDSMVLGDVFLSSAYVVFDLDNYKISLA 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_001285756.1 pepsin_retropepsin_like 59..369 CDD:299705 102/380 (27%)
Asp 68..371 CDD:278455 101/375 (27%)
BAR1NP_012249.1 SAP_like 43..395 CDD:133141 102/376 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.770

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