DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and AT4G22050

DIOPT Version :9

Sequence 1:NP_001285756.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_193936.2 Gene:AT4G22050 / 828294 AraportID:AT4G22050 Length:354 Species:Arabidopsis thaliana


Alignment Length:343 Identity:133/343 - (38%)
Similarity:187/343 - (54%) Gaps:22/343 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 KSYLRTKYQLPSLRSVDEE--QLSNSMNMAYYGAISIGTPAQSFKVLFDSGSSNLWVPSNTCKSD 103
            ::.:|...|:....|.:.:  ||.|..:..|||.|.||.|.|:|.||||:|||:|||||....:.
plant    16 EALVRIPLQIDHALSTNNDGVQLKNVKDFLYYGKIQIGNPGQTFTVLFDTGSSSLWVPSENWLAK 80

  Fly   104 ACLTHNQYDSSASSTYVANGESFSIQYGTGSLTGYLSTDTVDVNGLSIQSQTFAESTNEPGTN-F 167
            .....|:|.||||.|:..||....::||.|||||:||.|||.|.|:||.||||.|....|... |
plant    81 TENPRNRYISSASRTFKENGTKAELKYGKGSLTGFLSVDTVTVGGISITSQTFIEGVKTPYKEFF 145

  Fly   168 NDANFDGILGMAYESLAVDGVAPPFYNMVSQGLVDNSVFSFYLARDGTS--TMGGELIFGGSDAS 230
            ....||||||:.:......|.: .:::||.||.:..:|||.:|.|...|  ..|||::|||...:
plant   146 KKMPFDGILGLRFTDPLNFGTS-VWHSMVFQGKIAKNVFSIWLRRFSNSGEINGGEVVFGGIIPA 209

  Fly   231 LYSGALTYVPISEQGYWQFTMAGSSIDG--YSLCDD-CQAIADTGTSLIVAPYNAYITLSEILNV 292
            .:||..|||.:...|.: |.|:...:.|  .::|.. |:||.|:|:|.|..|.::...:...:.|
plant   210 HFSGDHTYVDVEGPGNF-FAMSNIWVGGKNTNICSSGCKAIVDSGSSNINVPMDSADEIHRYIGV 273

  Fly   293 GEDGYLDCSSVSSLPDVTFNIGGTNFVLKPSAYIIQSDGNCMSAFEYMG---TDFWILGDVFIGQ 354
            ..    :|::..:||||||.|||..|||.|..||.:|...|.|.|  :|   ...|.||..|:..
plant   274 EP----NCNNFETLPDVTFTIGGKAFVLTPLDYIRRSRSQCTSKF--VGKTNRSHWTLGIPFMRV 332

  Fly   355 YYTEFDLGNN---RIGFA 369
            ::|.||..|.   ::|||
plant   333 FHTVFDYQNTLAVKVGFA 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_001285756.1 pepsin_retropepsin_like 59..369 CDD:299705 128/323 (40%)
Asp 68..371 CDD:278455 127/314 (40%)
AT4G22050NP_193936.2 pepsin_retropepsin_like 36..351 CDD:386101 130/323 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.790

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