DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and Bace2

DIOPT Version :10

Sequence 1:NP_609235.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_062390.3 Gene:Bace2 / 56175 MGIID:1860440 Length:514 Species:Mus musculus


Alignment Length:441 Identity:118/441 - (26%)
Similarity:178/441 - (40%) Gaps:103/441 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VLLAALASAELHRVPILKEQNFVKTRQNVLAEKSYLRTKYQ--------LPSLRSVD-------- 57
            :||..||...|..||.|....|....|...|      |.::        .|.|...|        
Mouse     8 LLLPVLAQWLLSAVPALAPAPFTLPLQVARA------TNHRASAVPGLGTPELPRADGLALALEP 66

  Fly    58 ----------EEQLSNSMNMAYYGAISIGTPAQSFKVLFDSGSSNLWVPSNTCKSDACLTHN--- 109
                      .:.|.......||..:.||||.|..::|.|:||||..|        |...|:   
Mouse    67 VRATANFLAMVDNLQGDSGRGYYLEMLIGTPPQKVQILVDTGSSNFAV--------AGAPHSYID 123

  Fly   110 -QYDSSASSTYVANGESFSIQYGTGSLTGYLSTDTVDV-----NGLSIQSQTFAESTN--EPGTN 166
             .:||.:||||.:.|...:::|..||.||::..|.|.:     :...:...|..||.|  .||..
Mouse   124 TYFDSESSSTYHSKGFDVTVKYTQGSWTGFVGEDLVTIPKGFNSSFLVNIATIFESENFFLPGIK 188

  Fly   167 FNDANFDGILGMAYESLA--VDGVAPPFYNMVSQGLVDNSVFSFY-----LARDGTSTMGGELIF 224
            :|     ||||:||.:||  ...:...|.::|:|..:.: :||..     |...|:.|.||.|:.
Mouse   189 WN-----GILGLAYAALAKPSSSLETFFDSLVAQAKIPD-IFSMQMCGAGLPVAGSGTNGGSLVL 247

  Fly   225 GGSDASLYSGALTYVPISEQGYWQFTMAGSSIDGYSLCDDC------QAIADTGTSLIVAPYNAY 283
            ||.:.|||.|.:.|.||.|:.|:|..:....|.|.:|..||      :||.|:||:|:..|...:
Mouse   248 GGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQNLNLDCREYNADKAIVDSGTTLLRLPQKVF 312

  Fly   284 ------ITLSEILNVGEDGY-----LDCSSVSS-----LPDVTFNIGGTN------FVLKPSAYI 326
                  :..:.::....||:     |.|.:.|.     .|.::..:...|      ..:.|..||
Mouse   313 DAVVEAVARTSLIPEFSDGFWTGAQLACWTNSETPWAYFPKISIYLRDENASRSFRITILPQLYI 377

  Fly   327 IQSDGNCMSAFEY--------MGTDFWILGDVFIGQYYTEFDLGNNRIGFA 369
            ....|   :.|.|        ..|:..::|...:..:|..||....|:|||
Mouse   378 QPMMG---AGFNYECYRFGISSSTNALVIGATVMEGFYVVFDRAQRRVGFA 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_609235.1 pepsin_retropepsin_like 59..369 CDD:472175 101/363 (28%)
Bace2NP_062390.3 beta_secretase_like 85..446 CDD:133140 102/358 (28%)

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