DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and bace2

DIOPT Version :9

Sequence 1:NP_001285756.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_009289748.1 Gene:bace2 / 449818 ZFINID:ZDB-GENE-041010-68 Length:503 Species:Danio rerio


Alignment Length:415 Identity:115/415 - (27%)
Similarity:180/415 - (43%) Gaps:89/415 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ASAELHRVPILKEQNFVKTRQNVLAEKSYLRTKYQLPSLRSVDEEQLSNSMNM----------AY 69
            ||.:|...|:.|         |..|.||.|       ||.| |...:.|.::|          .|
Zfish    33 ASVQLDLRPLQK---------NEAAAKSGL-------SLAS-DPAGIVNFLDMINNLKGDSGRGY 80

  Fly    70 YGAISIGTPAQSFKVLFDSGSSNLWVPSNTCKSDACLTHNQYDSSASSTYVANGESFSIQYGTGS 134
            |..:.||||.|:..:|.|:||||..|   ...:...:|| .::.:.||||.:...:.:::|..|.
Zfish    81 YMQMIIGTPGQTLNILVDTGSSNFAV---AAAAHPYITH-YFNRALSSTYQSTERAVAVKYTQGE 141

  Fly   135 LTGYLSTDTVDV----NG---LSIQSQTFAESTNEPGTNFNDANFDGILGMAYESLA-VDGVAPP 191
            ..|.|.||.:.:    :|   ::|.:...:|....||     .|:.||||:||..|| .|....|
Zfish   142 WEGELGTDLITIPEGPSGAITINIAAILTSEGFFLPG-----INWQGILGLAYPLLARPDPSVEP 201

  Fly   192 FYNMV--SQGLVDNSVFSFYLARDG--TST----MGGELIFGGSDASLYSGALTYVPISEQGYWQ 248
            |:|.|  ..|:.|  |||..:...|  .||    .||.||.||.:.:|:.|.:.|.|:.|:.|:|
Zfish   202 FFNSVVRQTGIPD--VFSLQMCGAGVPASTTGDPAGGSLIMGGVEPTLHRGPIWYTPVLEEWYYQ 264

  Fly   249 FTMAGSSIDGYSLCDDC------QAIADTGTSLIVAPYNAY------ITLSEILNVGEDGYLDCS 301
            ..:....:...:|..||      :||.|:||:|:..|.|.:      |..:.:::....|:.|.:
Zfish   265 VEVLKLEVGDQNLNLDCKEYNSDKAIVDSGTTLLRLPANVFTAVVDTIMQTSLIDDFSAGFFDGT 329

  Fly   302 SVSS----------LPDVTFNIGGTN------FVLKPSAYI---IQSDGNCMSAFEY---MGTDF 344
            .::.          .|.|:..:.|||      ..:.|..||   ...||. :..|.:   ...:.
Zfish   330 KLACWMRGESPWRFFPKVSIYLRGTNTSQSFRITILPQLYIQPVTDIDGT-LDCFRFGISPSANG 393

  Fly   345 WILGDVFIGQYYTEFDLGNNRIGFA 369
            .::|...:..:|..||....|:|||
Zfish   394 LVIGATVMEGFYVIFDRAQKRVGFA 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_001285756.1 pepsin_retropepsin_like 59..369 CDD:299705 99/369 (27%)
Asp 68..371 CDD:278455 99/352 (28%)
bace2XP_009289748.1 beta_secretase_like 77..439 CDD:133140 99/354 (28%)
Asp 80..418 CDD:278455 97/349 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585937
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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