DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and asp-2

DIOPT Version :9

Sequence 1:NP_001285756.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_872129.1 Gene:asp-2 / 34700645 WormBaseID:WBGene00000215 Length:429 Species:Caenorhabditis elegans


Alignment Length:436 Identity:145/436 - (33%)
Similarity:216/436 - (49%) Gaps:83/436 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KTIAVVVLLAALASAELHRVPILKEQNFVKTRQNVLAEKSYLRTKYQLPSLRSVDEEQLSNSMNM 67
            :.:.:::.|.|.|.|.:.:||::|.:.:   |..::.|..:::.:......|.:..:| ||.|::
 Worm     2 QNLFLLLALVAAALAAVVQVPLVKIEPY---RNRLIREGRWVQYRKDREIRRFMMNKQ-SNDMSV 62

  Fly    68 ----------AYYGAISIGTPAQSFKVLFDSGSSNLWVPSNTC---------------------- 100
                      ||.|.|:||||.|.|||:.|:||||||:|..||                      
 Worm    63 GQYVNDYEDEAYVGNITIGTPQQQFKVILDTGSSNLWIPDITCGTKPENCSTVPACRGIICQFEC 127

  Fly   101 -----------KSDACLTHNQYDSSASSTYVANGESFSIQYGTGSLTGYLSTDTVDVNG-----L 149
                       .:|:|...|::|:|.||:|..||.:|.|:|||||..|:|..||:...|     |
 Worm   128 DDQACCGAGANYTDSCFYQNKFDASKSSSYKTNGRNFIIEYGTGSARGFLGQDTITFGGIGEPQL 192

  Fly   150 SIQSQTFAESTNEPGTNFNDANFDGILGMAYESLAVDGVAPPFYNMVSQGLVDNSVFSFYLARDG 214
            ::.:..|.::|: ....|.....|||||:|::|:|||.:.|||.|.::|.|||..:|:.:|..:|
 Worm   193 AVPNTVFGQATS-LAAFFEGQPLDGILGLAFKSIAVDQITPPFINAINQNLVDLPLFTVFLEHEG 256

  Fly   215 --TSTMGGELIFGGSDASLYSGALTYVPISEQGYWQFTMAGSSIDGYSLCDDCQAIADTGTSLIV 277
              ....||...:||.|.......:.|.|:|...|:||.|:......|......|.|:|||||||.
 Worm   257 DQNGVQGGVYTYGGIDTKNCGPVIAYQPLSSATYYQFKMSAIGSGSYHSSKGWQVISDTGTSLIG 321

  Fly   278 APYNAYITLSEILN-VG---EDGY----LDCSSVSSLPDVT-----FNIGGTNFVLKPSAYIIQS 329
            .| .||:  |.|.: ||   .|.|    |.||:..:..|:|     :||..:|.:      |...
 Worm   322 GP-KAYV--SAIADAVGATWRDDYGVYILPCSAKINTLDITIGNQVYNIDSSNTI------IPLG 377

  Fly   330 DG--NCMSA-FEYMGTDF---WILGDVFIGQYYTEFDLGNNRIGFA 369
            ||  ||:.| |.:....|   |||||.||.||...:|:|..|:|||
 Worm   378 DGSNNCIYAIFPFSSGGFGPSWILGDPFIRQYCNIYDVGTQRVGFA 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_001285756.1 pepsin_retropepsin_like 59..369 CDD:299705 133/378 (35%)
Asp 68..371 CDD:278455 131/361 (36%)
asp-2NP_872129.1 Asp 73..424 CDD:365818 131/361 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.030

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