DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and CG17134

DIOPT Version :10

Sequence 1:NP_609235.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_609458.1 Gene:CG17134 / 34494 FlyBaseID:FBgn0032304 Length:391 Species:Drosophila melanogaster


Alignment Length:389 Identity:214/389 - (55%)
Similarity:267/389 - (68%) Gaps:20/389 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KTIAVVVLLAAL--ASAELHRVPILKEQNFVKTRQNVLAEKSYLRTKYQLPSLRSVD------EE 59
            :.:.|:::|..:  ::|:|:||.:...:||.||..:|.|||:.|.:||...:..|..      .|
  Fly     2 RQLLVLLVLVGIGHSAAKLNRVQLQVNKNFTKTHGSVKAEKTVLASKYSFLAETSFSVSSSGATE 66

  Fly    60 QLSNSMNMAYYGAISIGTPAQSFKVLFDSGSSNLWVPSNTC--KSDACLTHNQYDSSASSTYVAN 122
            .|.||||..|||.|:||||.|.|.:|||:||:||||||.:|  .:.||..||:||||||||||||
  Fly    67 NLHNSMNNEYYGVIAIGTPEQRFNILFDTGSANLWVPSASCPASNTACQRHNKYDSSASSTYVAN 131

  Fly   123 GESFSIQYGTGSLTGYLSTDTVDVNGLSIQSQTFAESTNEPGTNFNDANFDGILGMAYESLAVDG 187
            ||.|:|:||||||:|:||.|.|.:.|:|||:|||.|:.:||||.|.||.|.||||:|:.::||||
  Fly   132 GEEFAIEYGTGSLSGFLSNDIVTIAGISIQNQTFGEALSEPGTTFVDAPFAGILGLAFSAIAVDG 196

  Fly   188 VAPPFYNMVSQGLVDNSVFSFYLARDGTSTMGGELIFGGSDASLYSGALTYVPISEQGYWQFTMA 252
            |.|||.||:||||:|..|.||||.|.||:..|||||.||.|:|||.|:|||||:|...||||.:.
  Fly   197 VTPPFDNMISQGLLDEPVISFYLKRQGTAVRGGELILGGIDSSLYRGSLTYVPVSVPAYWQFKVN 261

  Fly   253 GSSIDGYSLCDDCQAIADTGTSLIVAPYNAYITLSEIL----NVGEDGYLDCSSVSSLPDVTFNI 313
            ....:|..||:.||||||||||||..|..||..::..|    |.|| .::.|..|||||.|..||
  Fly   262 TIKTNGTLLCNGCQAIADTGTSLIAVPLAAYRKINRQLGATDNDGE-AFVRCGRVSSLPKVNLNI 325

  Fly   314 GGTNFVLKPSAYIIQSDGN----CMSAFEYM-GTDFWILGDVFIGQYYTEFDLGNNRIGFAPVA 372
            |||.|.|.|..||::...|    |||||.|| |..||||||||||::||.||.||.|||||.||
  Fly   326 GGTVFTLAPRDYIVKVTQNGQTYCMSAFTYMEGLSFWILGDVFIGKFYTVFDKGNERIGFARVA 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_609235.1 pepsin_retropepsin_like 59..369 CDD:472175 192/320 (60%)
CG17134NP_609458.1 pepsin_retropepsin_like 70..386 CDD:472175 190/316 (60%)

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