DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and CG6508

DIOPT Version :9

Sequence 1:NP_001285756.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_609457.1 Gene:CG6508 / 34493 FlyBaseID:FBgn0032303 Length:423 Species:Drosophila melanogaster


Alignment Length:378 Identity:192/378 - (50%)
Similarity:256/378 - (67%) Gaps:14/378 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IAVVVLLAALASAELHRVPILKEQNFVKTRQNVLAEKSYLRTKYQLPSLRSVDEEQ-LSNSMNMA 68
            |.:.:||...:..:|.|.||.::.|..||..||.|||..|..||.|...:|....| |:|..|:.
  Fly     9 IPLFLLLLDHSMGQLRRTPITRQINQNKTHANVKAEKILLAAKYFLVDRQSSQTTQVLANGFNLE 73

  Fly    69 YYGAISIGTPAQSFKVLFDSGSSNLWVPSNTCKS--DACLTHNQYDSSASSTYVANGESFSIQYG 131
            |...:.||||.|.|.:.||:|||:|||||..|.|  :||..||:|:|||||::|.:|:.||||||
  Fly    74 YTIRLCIGTPPQCFNLQFDTGSSDLWVPSVKCSSTNEACQKHNKYNSSASSSHVEDGKGFSIQYG 138

  Fly   132 TGSLTGYLSTDTVDVNGLSIQSQTFAESTNEPGTNFNDANFDGILGMAYESLAVDGVAPPFYNMV 196
            :|||:|:|||||||::|:.|::|||||:.:|||:.|.:..||||:|||:.|:: .||..||.|::
  Fly   139 SGSLSGFLSTDTVDIDGMVIRNQTFAEAIDEPGSAFVNTIFDGIIGMAFASIS-GGVTTPFDNII 202

  Fly   197 SQGLVDNSVFSFYLARDGTSTMGGELIFGGSDASLYSGALTYVPISEQGYWQFTMAGSSIDGYSL 261
            .||||.:.|||.||.|||||..|||:|:||.|.|:|.|.:.|||:|...|||||.....|:|..|
  Fly   203 RQGLVKHPVFSVYLRRDGTSQSGGEVIWGGIDRSIYRGCINYVPVSMPAYWQFTANSVKIEGILL 267

  Fly   262 CDDCQAIADTGTSLIVAPYNAYITLSEILNVGEDG----YLDCSSVSSLPDVTFNIGGTNFVLKP 322
            |:.||||||||||||..|..||..::::||..:.|    ::||||:..||:|..|||||.:.|.|
  Fly   268 CNGCQAIADTGTSLIAVPLRAYKAINKVLNATDAGDGEAFVDCSSLCRLPNVNLNIGGTTYTLTP 332

  Fly   323 SAYI--IQSDGN---CMSAFEYM-GTDFWILGDVFIGQYYTEFDLGNNRIGFA 369
            ..||  :|:|.|   |:|.|.|: |...|||||:|:|:.||.||:|..|||||
  Fly   333 KDYIYKVQADNNQTLCLSGFTYLQGNLLWILGDIFLGKVYTVFDVGKERIGFA 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_001285756.1 pepsin_retropepsin_like 59..369 CDD:299705 170/322 (53%)
Asp 68..371 CDD:278455 168/314 (54%)
CG6508NP_609457.1 pepsin_retropepsin_like 68..386 CDD:299705 170/319 (53%)
Asp 73..387 CDD:278455 168/314 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449705
Domainoid 1 1.000 297 1.000 Domainoid score I1463
eggNOG 1 0.900 - - E1_KOG1339
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 319 1.000 Inparanoid score I2536
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 1 1.000 - - mtm978
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1456
109.900

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