DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bace and CG31926

DIOPT Version :10

Sequence 1:NP_609235.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_722706.1 Gene:CG31926 / 326174 FlyBaseID:FBgn0051926 Length:410 Species:Drosophila melanogaster


Alignment Length:396 Identity:168/396 - (42%)
Similarity:235/396 - (59%) Gaps:33/396 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IAVVVLLAALASAE------LHRVPILKEQNF--------VKTRQNVLAEKSYLRTKYQLPSLRS 55
            :.|:.:||..|.|.      ||:.|...|:|.        :|...||...|:..:|..::|..:.
  Fly    15 LTVLAVLAFEAEARKRVRIGLHKNPEPIEENIKNELKTLSIKHNLNVDDTKAKTKTDTKVPGSKV 79

  Fly    56 VDEEQLSNSMNMAYYGAISIGTPAQSFKVLFDSGSSNLWVPSNTCKSDA--CLTHNQYDSSASST 118
            .   .|.|..|..||..:..|.|.|..|||.|:||:||||.|:.|....  |....:|:||||:|
  Fly    80 A---TLENLYNTEYYTTLGFGNPPQDLKVLIDTGSANLWVLSSKCPDSVAPCANRIKYNSSASTT 141

  Fly   119 YVANGESFSIQYGTGS------LTGYLSTDTVDVNGLSIQSQTFAESTNEPGTNFNDANFDGILG 177
            |.|...:|:|.||:.|      |:|:.|.|||:..|.||::|.|||.||.|.|.|..:..|||||
  Fly   142 YRAINTAFNIAYGSNSEEGPIALSGFQSQDTVNFAGYSIKNQIFAEITNAPETAFLKSQLDGILG 206

  Fly   178 MAYESLAVDGVAPPFYNMVSQGLVDNSVFSFYLARDGTSTM-GGELIFGGSDASLYSGALTYVPI 241
            :.:.|:|::.:.|||||:::||||:.||||.||.|:||:.: |||||.||||:.||||.|||||:
  Fly   207 LGFASIAINSITPPFYNLMAQGLVNRSVFSIYLNRNGTNAINGGELILGGSDSGLYSGCLTYVPV 271

  Fly   242 SEQGYWQFTMAGSSIDGYSLCDDCQAIADTGTSLIVAPYNAYITLSEILNV----GEDG--YLDC 300
            |..|||||||..::::|:..|::|:||.|.||||||.|.....|:::||.|    ..:|  .:||
  Fly   272 SSAGYWQFTMTSANLNGFQFCENCEAILDVGTSLIVVPEQVLDTINQILGVLNPTASNGVFLVDC 336

  Fly   301 SSVSSLPDVTFNIGGTNFVLKPSAYIIQSDGNCMSAFEYM-GTDFWILGDVFIGQYYTEFDLGNN 364
            ||:..|||:.|.:....|.||.|.|:::....|:|.|..| |....|||::|:|.|||.:|:...
  Fly   337 SSIGDLPDIVFTVARRKFPLKSSDYVLRYGNTCVSGFTSMNGNSLLILGEIFLGAYYTTYDIVYK 401

  Fly   365 RIGFAP 370
            .||.||
  Fly   402 LIGLAP 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_609235.1 pepsin_retropepsin_like 59..369 CDD:472175 150/325 (46%)
CG31926NP_722706.1 Asp 89..408 CDD:394983 149/319 (47%)

Return to query results.
Submit another query.