DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and asp-17

DIOPT Version :9

Sequence 1:NP_001285756.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_741673.1 Gene:asp-17 / 180250 WormBaseID:WBGene00012683 Length:391 Species:Caenorhabditis elegans


Alignment Length:399 Identity:138/399 - (34%)
Similarity:203/399 - (50%) Gaps:56/399 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VVLLAALASAELHRVPILKEQNFVKTRQNVLAEKSYLRT-KYQ-------LPSLRSVDEEQLSNS 64
            ::.||...||.:.::|         |:.........:|. |||       ...|.:: .:.:|:.
 Worm     6 LLFLAPFCSAAVFQLP---------TKSTGSLRAKLIRAGKYQEFLITQHAARLNTI-SQPISDY 60

  Fly    65 MNMAYYGAISIGTPAQSFKVLFDSGSSNLWVPSNTCKSDAC-------LTHNQYDSSASSTYVAN 122
            .:..|.|..::|||.|...::.|:||:|:||...:|.:..|       .|..::|:|.||::...
 Worm    61 SDEVYLGNFTVGTPPQPVSLVLDTGSANMWVIDASCDNMFCNGWIGSNYTRQKFDTSKSSSFSRE 125

  Fly   123 GESFSIQYGTGSLTGYLSTDTVDV-NGLSIQSQTFAESTNEPGTNFNDANFDGILGMAYESLAVD 186
            ...||||||.|..:|||.||||.: .||:|:.|... ..|:...:|.....|||.|:|:.:||||
 Worm   126 NRKFSIQYGKGLCSGYLGTDTVGLGGGLTIRKQELG-IANKLDVDFAVQPMDGIFGLAWPALAVD 189

  Fly   187 GVAPPFYNMVSQGLVDNSVFSFYLARDGTSTMGGE---LIFGGSDASLYSGALTYVPISEQGYWQ 248
            .:.||..|::||  :|..|||.:|.|...::.||.   :.:||.|.......:||||::.:.|||
 Worm   190 QITPPMQNLISQ--LDVPVFSVWLDRKIQASHGGSAGMITYGGIDTKNCDAGVTYVPLTAKTYWQ 252

  Fly   249 FTMAGSSIDGYSLCDDCQAIADTGTSLIVAPY---NAYIT--------LSEILNVGEDGYLDCSS 302
            |.|.|.::..||.....|.|:|||:|.|.|||   |...|        ::||..|      .||:
 Worm   253 FKMDGFAVGTYSQYGYNQVISDTGSSWISAPYAMINDIATQTHATWDEMNEIYTV------KCST 311

  Fly   303 VSSLPDVTFNIGGTNFVLKPSAYIIQ---SDGNCMSAFE-YMGTDF---WILGDVFIGQYYTEFD 360
            :.:.||:.|.|||..|.:|...||:.   .:|.|..|.. .|.:.|   ||||||||.||...:|
 Worm   312 MKTQPDLVFTIGGALFPVKSVEYILDIGLDEGKCALAISPLMASGFGPSWILGDVFIRQYCNIYD 376

  Fly   361 LGNNRIGFA 369
            :||.|||||
 Worm   377 IGNARIGFA 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_001285756.1 pepsin_retropepsin_like 59..369 CDD:299705 125/338 (37%)
Asp 68..371 CDD:278455 126/331 (38%)
asp-17NP_741673.1 Asp 65..387 CDD:365818 126/330 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161979
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.860

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