DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bace and asp-12

DIOPT Version :9

Sequence 1:NP_001285756.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_505134.1 Gene:asp-12 / 179210 WormBaseID:WBGene00017678 Length:395 Species:Caenorhabditis elegans


Alignment Length:396 Identity:131/396 - (33%)
Similarity:204/396 - (51%) Gaps:36/396 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKTIAVVVLLAALASAEL--HRVPILKEQNFVKTRQNVLAEKSYLRTKYQL----PSLRSVDEE 59
            |..|:...|.:..:.||.:  |::...:.......|:....  :|::.|..|    |::.:...:
 Worm     1 MKTTLLAFVAILGMCSATVVQHKLIYRESPKMQMMRRGEWG--AYVQHKAALRDANPAVFASAPQ 63

  Fly    60 QLSNSMNMAYYGAISIGTPAQSFKVLFDSGSSNLWVPSNTCKSDACLTHNQYDSSASSTYVANGE 124
            .:::..::.|.|.|:||||.|.|.|:.|:||:|||||.:.| ...|...:::|||.|:|:..||:
 Worm    64 NVNDFGDVEYLGNITIGTPPQQFIVVLDTGSANLWVPGSNC-DGTCKGKSEFDSSKSTTFKKNGQ 127

  Fly   125 SFSIQYGTGSLTGYLSTDTVDVNGLS-----IQSQTFAESTNEPGTNFNDANFDGILGMAYESLA 184
            |:.|||.:||..|.:..|||...|.|     :.|.||..::: ..:||.:...:||||:|:.|||
 Worm   128 SWQIQYESGSAKGIMGVDTVAFGGASEQQLLVPSTTFGIASH-ISSNFKNDAAEGILGLAFTSLA 191

  Fly   185 VDGVAPPFYNMVSQGLVDNSVFSFYLARDGT--STMGGELIFGGSDASLYSGALTYVPISEQGYW 247
            ||||.||..|.:::.::|..:|:.:|...||  :..||...:|..|.:.....:.|.|:|...|:
 Worm   192 VDGVTPPLINAINKKILDQPLFTVFLEHKGTAKNVGGGVFTYGAVDTTNCGPVIAYQPLSSATYY 256

  Fly   248 QFTMAGSSIDGYSLCDDCQAIADTGTSLIVAPYNAYITLSEILNV----GEDG-YLDCSSVSSLP 307
            ||...|..:..||.....|.|:|||:|||..|.......::.|..    .:|. ||.||:.....
 Worm   257 QFVADGFKLGSYSNNKKSQVISDTGSSLIGGPSAVINGFAQALGAKYHSDDDAYYLPCSTSKGTL 321

  Fly   308 DVTFNIGGTNFVLKPSAYII---QSDGNCMSAFEYMGTDF------WILGDVFIGQYYTEFDLGN 363
            |:|  |||..:.::|..||:   ..|....:||.:   ||      ||.||.||.||...:|:|.
 Worm   322 DIT--IGGNVYSIEPVNYILDVGMGDTCVFAAFSF---DFGGFGPSWIFGDPFIRQYCNIYDIGQ 381

  Fly   364 NRIGFA 369
            .|||||
 Worm   382 QRIGFA 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_001285756.1 pepsin_retropepsin_like 59..369 CDD:299705 118/330 (36%)
Asp 68..371 CDD:278455 120/323 (37%)
asp-12NP_505134.1 Asp 72..388 CDD:365818 120/323 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161966
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.850

Return to query results.
Submit another query.