DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and LOC101733630

DIOPT Version :9

Sequence 1:NP_001285756.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_012817292.3 Gene:LOC101733630 / 101733630 -ID:- Length:343 Species:Xenopus tropicalis


Alignment Length:320 Identity:145/320 - (45%)
Similarity:198/320 - (61%) Gaps:21/320 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 YYGAISIGTPAQSFKVLFDSGSSNLWVPSNTCK--SDACLTHNQYDSSASSTYVANGESFSIQYG 131
            |||.|.:|:|.|:|.|:||:|||||||||..|.  ..||..|::||||.|||||.||.:|:||||
 Frog    23 YYGEIGLGSPPQNFTVVFDTGSSNLWVPSVHCSMLDIACWMHHKYDSSKSSTYVKNGTAFAIQYG 87

  Fly   132 TGSLTGYLSTDTVDVNGLSIQSQTFAESTNEPGTNFNDANFDGILGMAYESLAVDGVAPPFYNMV 196
            ||||:||||.|||.:..|:::.|.|.|:..:||..|..|.|||||||||..::||||.|.|.|::
 Frog    88 TGSLSGYLSKDTVTIGNLAVKGQMFGEAVKQPGVTFVAAKFDGILGMAYPVISVDGVPPVFDNIM 152

  Fly   197 SQGLVDNSVFSFYLARDGTSTMGGELIFGGSDASLYSGALTYVPISEQGYWQFTMAGSSI-DGYS 260
            :|.||::::|||||.|:..:..||||:.||:|...|:|...|:.::.:.|||..|....: |..:
 Frog   153 AQKLVESNIFSFYLNRNPDTQPGGELLLGGTDPKYYTGDFHYLNVTRKAYWQIHMDQLGVGDQLT 217

  Fly   261 LC-DDCQAIADTGTSLIVAPYNAYITLSEILN----VGEDGYLDCSSVSSLPDVTFNIGGTNFVL 320
            || ..|:.|.|||||||..|......|.:.:.    :.....:.|..|.:||.::..:||..:.|
 Frog   218 LCKGGCEVIVDTGTSLITGPLEEVTALQKAIGAVPLIQGQYMVQCDKVPTLPVISLTLGGQVYTL 282

  Fly   321 KPSAYI--IQSDGN--CMSAFEYMGTD-------FWILGDVFIGQYYTEFDLGNNRIGFA 369
            ....||  :...|:  |:|.|  ||.:       .||||||||||||:.||...:|:|||
 Frog   283 TGEQYIMKVSQRGSTICLSGF--MGLNIPPPAGPLWILGDVFIGQYYSVFDRAYDRVGFA 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_001285756.1 pepsin_retropepsin_like 59..369 CDD:299705 143/318 (45%)
Asp 68..371 CDD:278455 145/320 (45%)
LOC101733630XP_012817292.3 Cathepsin_D2 18..341 CDD:133157 145/320 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.030

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