DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and bace2

DIOPT Version :10

Sequence 1:NP_609235.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001135590.1 Gene:bace2 / 100216145 XenbaseID:XB-GENE-1014090 Length:499 Species:Xenopus tropicalis


Alignment Length:437 Identity:119/437 - (27%)
Similarity:173/437 - (39%) Gaps:102/437 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IAVVVLLAALASAELHRVPILKEQNFVKTRQNVLAEKSYL-----RTKYQLPSLRSVDE------ 58
            :||::|.||.|||           ||:...:...||....     .|....|.|....:      
 Frog     6 LAVLLLGAACASA-----------NFIFPLKVSPAEMKGAVPVAPATPKGAPGLLLASDPGGQIN 59

  Fly    59 -----EQLSNSMNMAYYGAISIGTPAQSFKVLFDSGSSNLWV-----PSNTCKSDACLTHNQYDS 113
                 ..|.......||..:.||||.|...:|.|:||||..|     |..|         ..:||
 Frog    60 FFSMVNNLEGDSGRGYYLELLIGTPPQKMNILVDTGSSNFAVAGALNPDIT---------TFFDS 115

  Fly   114 SASSTYVANGESFSIQYGTGSLTGYLSTDTVD----VNGLSI-------QSQTFAESTNEPGTNF 167
            ..|::|.......:::|..||.||.|..|.:.    |||..:       ||:.|.         .
 Frog   116 KLSTSYEPLNTQVTVRYTQGSWTGLLGKDVISMPKGVNGTFLINIASIFQSENFF---------L 171

  Fly   168 NDANFDGILGMAYESLA--VDGVAPPFYNMVSQGLVDNSVFSFYLARDGTSTMG-----GELIFG 225
            .:.|:.||||:||.:||  ...|.|.|.::|.|..:.| :||..:...|..:.|     |.|:.|
 Frog   172 PNINWQGILGLAYSTLAKPSSSVEPFFDSLVQQENIPN-IFSMQMCGAGQPSPGIGINAGSLVLG 235

  Fly   226 GSDASLYSGALTYVPISEQGYWQFTMAGSSIDGYSLCDDC------QAIADTGTSLIVAP----- 279
            |.:.|||.|.:.|.||:|:.|:|..:....:.|.:|..||      :||.|:||:|:..|     
 Frog   236 GIEPSLYQGDIWYTPITEEWYYQVEVLKFEVGGQNLNLDCTVYNSDKAIVDSGTTLLRLPDKVFN 300

  Fly   280 --YNAYITLSEILNVGEDGY----LDCSSVSS-----LPDVTFNIGGTN------FVLKPSAYI- 326
              .:|.:..|.|.|...:.:    |.|...:.     .||::..:..||      ..|||..|| 
 Frog   301 AMVDAIVQTSLIQNFNAEFWAGLQLACWDKTQDPWNYFPDISIYLRDTNSSRSFRLTLKPQLYIQ 365

  Fly   327 ----IQSDGNCMSAFEYMGTDFWILGDVFIGQYYTEFDLGNNRIGFA 369
                .|...||............::|...:..:|..||....|:|||
 Frog   366 SVLTFQESLNCFRFGISQSASALVIGATVMEGFYVIFDRAEKRVGFA 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_609235.1 pepsin_retropepsin_like 59..369 CDD:472175 102/365 (28%)
bace2NP_001135590.1 beta_secretase_like 72..433 CDD:133140 103/360 (29%)

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