DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13088 and CG5003

DIOPT Version :9

Sequence 1:NP_609234.2 Gene:CG13088 / 34180 FlyBaseID:FBgn0032047 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_651593.1 Gene:CG5003 / 43344 FlyBaseID:FBgn0039554 Length:713 Species:Drosophila melanogaster


Alignment Length:383 Identity:78/383 - (20%)
Similarity:127/383 - (33%) Gaps:147/383 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 HLRSLDCHMDYNLEEADEETLLLTELFPLLTRLSLNSSTTGRYLWHWKQLRELNLTWCEYLDPD- 159
            |..|||...:.||.:..:|  ||.|:|                               :|||.. 
  Fly    57 HKESLDRETECNLMDFCDE--LLFEIF-------------------------------QYLDTSS 88

  Fly   160 -----HFEEIFGNLQLTKLTMLYYGYNVNLGEKVVDIT-----RCTTLEELHI-------DDHHL 207
                 |....|.||.|..  ..|:..:::.|...:.|.     |.|  |:.|.       ...|:
  Fly    89 ILAVMHCSPRFENLLLDH--RFYHHIDLSNGPLPMGILEEILGRAT--EKTHTIKICGPPSSQHV 149

  Fly   208 LGDF----------LPRLMNLPHFRRLAFYTRDYYEYL----LGSVARHKPLKVQSLLFNDS--- 255
            .|:|          .||::.| ....|...:.| :||:    ..:..|...||..|:...|:   
  Fly   150 AGEFRQFTQTLSSVFPRVVQL-KVLELEGVSLD-FEYIHITEFPATLRRLKLKDCSVRVGDTPKS 212

  Fly   256 -FWSSERVAGSILHMTNLRRLVLQEDDIDAQQLHTICHKLPNLEELHLLAMREVPSPSHLWNSIG 319
             |:|.|      ||:.:|..|.::::..              .|..:::.:.::||...|  |:.
  Fly   213 IFYSIE------LHLLDLEDLSIEDNSW--------------FEPYYIMGLSKLPSLRRL--SLK 255

  Fly   320 HCHL------------------LRILNLSSTKLVDLRSSC------LTKVLLSRRIPLTLH---- 356
            .|..                  |..|:|..|.:.:....|      |.::||..  |..||    
  Fly   256 GCQALCKFVPYGSMAARFGFQKLESLDLRQTPINNSDLQCFSAIENLKELLLES--PQILHSKQA 318

  Fly   357 --LHNTG-----------LDPSKVLRDFDSASLKISFEPIHLNIWSPRFVEIEFSPDS 401
              ..||.           .|..|||.|.:.::.:.:.|  ||     |..::.|:.|:
  Fly   319 VAKKNTNGNATDEAASPQPDSLKVLSDDEPSTSRAAME--HL-----RACKVAFNLDN 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13088NP_609234.2 None
CG5003NP_651593.1 F-box 68..114 CDD:279040 16/80 (20%)
leucine-rich repeat 610..635 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR16134
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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