Sequence 1: | NP_609234.2 | Gene: | CG13088 / 34180 | FlyBaseID: | FBgn0032047 | Length: | 401 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
Alignment Length: | 355 | Identity: | 73/355 - (20%) |
---|---|---|---|
Similarity: | 127/355 - (35%) | Gaps: | 109/355 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 EQINEDVWIDILKYLPMRDQLSLVEVNENISAYVKYH--WSHLK--TVTLTREDLDFLDRNNKLM 62
Fly 63 HECLGGWSATVERLNLQSASSDLLRKWTEYDFPHLRSLDCHMDYNLEEADEETLLLTELFPLLTR 127
Fly 128 LSLNSSTTGRYLWHWKQLRELNLTWCEYLDPDHFEEIFGN--LQLTKLTMLYYGYNVNLGEKVVD 190
Fly 191 ITRCTTLEELHIDDHHLLGDFLPRL----------MNLPHFRRLAFYTRDYYEYLLGSVARHKPL 245
Fly 246 KVQSLLFNDSFWSSERVAGSILHMTNLRRLVLQEDDIDAQQLHTICHKL-PNLEELHLLAMREVP 309
Fly 310 SPSHLWNSIGHCHLLRILNLSSTKLVDLRS 339 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG13088 | NP_609234.2 | None | |||
Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | 10/43 (23%) |
leucine-rich repeat | 302..327 | CDD:275381 | 7/35 (20%) | ||
AMN1 | 309..480 | CDD:187754 | 48/244 (20%) | ||
leucine-rich repeat | 328..352 | CDD:275381 | 8/46 (17%) | ||
leucine-rich repeat | 353..376 | CDD:275381 | 9/23 (39%) | ||
leucine-rich repeat | 377..402 | CDD:275381 | 6/27 (22%) | ||
leucine-rich repeat | 403..428 | CDD:275381 | 6/24 (25%) | ||
leucine-rich repeat | 429..455 | CDD:275381 | 8/64 (13%) | ||
leucine-rich repeat | 456..480 | CDD:275381 | 5/31 (16%) | ||
leucine-rich repeat | 481..500 | CDD:275381 | 6/25 (24%) | ||
leucine-rich repeat | 506..529 | CDD:275381 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR16134 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |