DRSC/TRiP Functional Genomics Resources

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Protein Alignment d and MYO2

DIOPT Version :9

Sequence 1:NP_001188730.1 Gene:d / 34179 FlyBaseID:FBgn0262029 Length:1426 Species:Drosophila melanogaster
Sequence 2:NP_014971.1 Gene:MYO2 / 854504 SGDID:S000005853 Length:1574 Species:Saccharomyces cerevisiae


Alignment Length:797 Identity:223/797 - (27%)
Similarity:365/797 - (45%) Gaps:98/797 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   476 QDLIHLSGPLTEHAVMRTLQARFNERRYFTNVGPILLSINPYLDVGNPLT------LTSTRAMPL 534
            :||..|| .|.|.||:..::.|:::...:|..|.:|::.||:..|....|      ....|...|
Yeast    73 EDLTSLS-YLNEPAVLHAIKQRYSQLNIYTYSGIVLIATNPFDRVDQLYTQDMIQAYAGKRRGEL 136

  Fly   535 APQLQKIVQEAVRQQSETGYPQAIILSGTSGAGKTANAMLMLRQLFAIAGGGPET--------DA 591
            .|.|..|.:||.|........|.|::||.||||||.:|..::|...::......|        :.
Yeast   137 EPHLFAIAEEAYRLMKNDKQNQTIVVSGESGAGKTVSAKYIMRYFASVEEENSATVQHQVEMSET 201

  Fly   592 FKHLAAAFTVLRSLGSAKTTTNSESSRIGQFIEVQV-TDGALYRTKIHCYFLDQTRVIRPLPKEK 655
            .:.:.|...::.:.|:||||.|..|||.|:::|:.. .|.::...:|..|.|:::|::...|.|:
Yeast   202 EQKILATNPIMEAFGNAKTTRNDNSSRFGKYLEILFDKDTSIIGARIRTYLLERSRLVYQPPIER 266

  Fly   656 NYHIFYQLLAGLSREERQKLHLDGYSPANLRYLRGDIGQNEQEDAARFQAWKTCLGILGI---PF 717
            ||||||||:|||..:.:::|||...|........||...|..:||..::.....|.::||   ..
Yeast   267 NYHIFYQLMAGLPAQTKEELHLTDASDYFYMNQGGDTKINGIDDAKEYKITVDALTLVGITKETQ 331

  Fly   718 LDVVRVLAAVLLLGNVQF---IDGGGLEVDVKGETELNSVASLLGVPPAALFRGLTTRTHNVRGQ 779
            ..:.::|||:|.:||::.   .:...|..|   |..|.....|||:......:.:|.:....|.:
Yeast   332 HQIFKILAALLHIGNIEIKKTRNDASLSAD---EPNLKLACELLGIDAYNFAKWVTKKQIITRSE 393

  Fly   780 LVKSVCGDGDANMTRDCLAKALYCRTVATIVRRANSLKRLGSTLGTLSSDSNESVHNQADVASQH 844
            .:.|......|.:.:|.:||.:|......:|...|::.            .|.:|::|.      
Yeast   394 KIVSNLNYSQALVAKDSVAKFIYSALFDWLVENINTVL------------CNPAVNDQI------ 440

  Fly   845 ASTIGGGNAGSKSMAALNNAVRHATSDGFIGILDMFGFEEPSPHAHLEHLCINLCAETMQHFYNT 909
                                      ..|||:||::|||....:: .|..|||...|.:|..:|.
Yeast   441 --------------------------SSFIGVLDIYGFEHFEKNS-FEQFCINYANEKLQQEFNQ 478

  Fly   910 HIFKSSVESCRDEGIVCDTEVDYVDNVPCIDLISSLRTGLLSMLDAECSV-RGTAESYVTKLKVQ 973
            |:||...|....|.|.. :.:::.||.||||||.: :.|:||:||.|..: .|:.||:..||   
Yeast   479 HVFKLEQEEYVKEEIEW-SFIEFNDNQPCIDLIEN-KLGILSLLDEESRLPAGSDESWTQKL--- 538

  Fly   974 HRSSTRLETKPTAEPHD-PRM----FLIRHFAGRVEYDTTDFLDTNRDVVPDDLVGVFYKHTCNF 1033
               ...|:..||.:... ||.    |::.|:|..|.||...|::.|||.|.|..:.|. |.:.|.
Yeast   539 ---YQTLDKSPTNKVFSKPRFGQTKFIVSHYALDVAYDVEGFIEKNRDTVSDGHLEVL-KASTNE 599

  Fly  1034 GFATHLFGSELKALYAQQQAPRGLSFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRTLVHAR 1098
            .....|.|.| ||....::|.: |....:.:.....:.......||...|...|..|:.|:....
Yeast   600 TLINILEGLE-KAAKKLEEAKK-LELEQAGSKKPGPIRTVNRKPTLGSMFKQSLIELMNTINSTN 662

  Fly  1099 PHFVRCIRSNGTEAARSFDRATVVRQIRSLQVLETVNLMASGFPHRMRFKQFNARYRMLAP---F 1160
            .|::|||:.|..:.|..||...|:.|:|:..||||:.:..:|||.|..|::|..||.:|.|   :
Yeast   663 VHYIRCIKPNADKEAWQFDNLMVLSQLRACGVLETIRISCAGFPSRWTFEEFVLRYYILIPHEQW 727

  Fly  1161 RLLRRSEDKALEDCQLILKYAMEQPPVLDGSV--TLAWAPGKRHVFLSEGIRQHLEHLRTEIRHK 1223
            .|:.:.::...||...::|.      :||.:|  ...:..|...:|...|:..:||.||:...|.
Yeast   728 DLIFKKKETTEEDIISVVKM------ILDATVKDKSKYQIGNTKIFFKAGMLAYLEKLRSNKMHN 786

  Fly  1224 SATLMQATWRGWWWRKK 1240
            |..::|...|..::||:
Yeast   787 SIVMIQKKIRAKYYRKQ 803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dNP_001188730.1 MYSc 476..1217 CDD:214580 215/772 (28%)
MYSc_Myo20 488..1206 CDD:276847 206/749 (28%)
MYO2NP_014971.1 COG5022 2..1567 CDD:227355 223/797 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0160
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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