DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment d and VIIIA

DIOPT Version :9

Sequence 1:NP_001188730.1 Gene:d / 34179 FlyBaseID:FBgn0262029 Length:1426 Species:Drosophila melanogaster
Sequence 2:NP_175453.2 Gene:VIIIA / 841458 AraportID:AT1G50360 Length:1153 Species:Arabidopsis thaliana


Alignment Length:960 Identity:266/960 - (27%)
Similarity:416/960 - (43%) Gaps:165/960 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 PLPHQLAEKPGLSHQQSG-----SGHGQS--TGTLPHMSGMGSILGQNSHSHAPVNNNSNNS--- 398
            |..::....|...|.::.     :||.::  .||...:.||.|:...:.:|...:.|...:|   
plant    16 PADYRFLGSPISDHLETNLITPPNGHLKNGVNGTASSVGGMDSVNEDSPYSVRSILNGERSSIGD 80

  Fly   399 --NTLPMRTSNSGHLGINGGGVGHHLSHAHSQQLPFIPQSKHTNPCQSVKTLPFGFGFSESQQKM 461
              :.||:..||........       .:|..:.|.|..|..:.|       ...|...|.|.::.
plant    81 GDSILPLPESNDRKWSDTN-------VYARKKVLQFWVQLPNGN-------WELGKIMSTSGEES 131

  Fly   462 QQQQQQGN-----------SSP---KDMQDLIHLSGPLTEHAVMRTLQARFNERRYFTNVGPILL 512
            .....:|.           ::|   ..:.||:.|| .|.|.||:..|:.|:|:...:|..||:|:
plant   132 VIVVTEGKVLKVKSETLVPANPDILDGVDDLMQLS-YLNEPAVLYNLEYRYNQDMIYTKAGPVLV 195

  Fly   513 SINPYLDV---GNPLTLTSTRAMPLAPQLQKIVQEAVRQQSETGYPQAIILSGTSGAGKTANAML 574
            ::||:.:|   ||.......:....:|.:..|...|:|:.......|:||:||.||||||..|.:
plant   196 AVNPFKEVPLYGNRNIEAYRKRSNESPHVYAIADTAIREMIRDEVNQSIIISGESGAGKTETAKI 260

  Fly   575 MLRQLFAIAGG-GPETDAFKHLAAAFTVLRSLGSAKTTTNSESSRIGQFIEVQVTD-GALYRTKI 637
            .::.|.|:.|| |.|.:..|    ...:|.:.|:|||..|..|||.|:.||:..:: |.:...:|
plant   261 AMQYLAALGGGSGIEYEILK----TNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGAQI 321

  Fly   638 HCYFLDQTRVIRPLPKEKNYHIFYQLLAGLSREERQKLHLDGYSPANLRYLRGD--IGQNEQEDA 700
            ..:.|:::||::....|::|||||||.||.|...|:||:|.  |.....||:..  ...|..:||
plant   322 QTFLLEKSRVVQCTEGERSYHIFYQLCAGASPTLREKLNLT--SAKQYNYLKQSNCYSINGVDDA 384

  Fly   701 ARFQAWKTCLGILGIPFLD---VVRVLAAVLLLGNVQF--IDGGGLEVDVKGETELNSVASLLGV 760
            .||.|.|..|.|:.:...|   |..:|||||.||||.|  ||... .|:.:.:..|::||.|:|.
plant   385 ERFHAVKEALDIVHVSKEDQENVFAMLAAVLWLGNVSFTIIDNEN-HVEPEPDESLSTVAKLIGC 448

  Fly   761 PPAALFRGLTTRTHNVRGQLVKSVCGDGDANMTRDCLAKALYCRTVATIVRRANSLKRLGSTLGT 825
            ....|...|:.|...|....:........|...||.|||::|......:|.:.|           
plant   449 NINELKLALSKRNMRVNNDTIVQKLTLSQAIDARDALAKSIYACLFDWLVEQIN----------- 502

  Fly   826 LSSDSNESVHNQADVASQHASTIGGGNAGSKSMAALNNAVRHATSDGFIGILDMFGFEEPSPHAH 890
                                          ||:     ||....:...|.|||::|||..:.:: 
plant   503 ------------------------------KSL-----AVGKRRTGRSISILDIYGFESFNKNS- 531

  Fly   891 LEHLCINLCAETMQHFYNTHIFKSSVESCRDEGIVCD-TEVDYVDNVPCIDLISSLRTGLLSMLD 954
            .|..|||...|.:|..:|.|:||...|....:||  | |.||:.||..|:.|......||||:||
plant   532 FEQFCINYANERLQQHFNRHLFKLEQEEYIQDGI--DWTRVDFEDNQECLSLFEKKPLGLLSLLD 594

  Fly   955 AECSV-RGTAESYVTKLKVQHRSSTRLETKPTAEPHDPRMFLIRHFAGRVEYDTTDFLDTNRDVV 1018
            .|.:. .||..:...||| ||     |...........:.|.:.|:||.|.|:||.||:.|||::
plant   595 EESTFPNGTDLTLANKLK-QH-----LNDNSCFRGDRGKAFTVAHYAGEVTYETTGFLEKNRDLL 653

  Fly  1019 PDDLVGVFYKHTCNFGFATHLFGSELKALYAQQQAPRGLSFRISPTSHSDLLNGDEPVSTLTQDF 1083
            ..|.:.:....:|:...|   |.|.: .:|:::..       :.|...:.  ..|....::...|
plant   654 HSDSIQLLSSCSCHLPQA---FASSM-LIYSEKPL-------VGPLHKAG--GADSQRLSVATKF 705

  Fly  1084 HTRLDNLLRTLVHARPHFVRCIRSNGTEAARSFDRATVVRQIRSLQVLETVNLMASGFPHRMRFK 1148
            ..:|..|::.|.:..|||:|||:.|..::|..:::..|::|:|...|||.|.:..||||.||...
plant   706 KGQLFQLMQRLGNTTPHFIRCIKPNNVQSAGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMFHH 770

  Fly  1149 QFNARYRMLAPFRLLRRSEDKALEDCQLILKYAMEQPPVLD-----GSVTLAWAPGK-------- 1200
            :|..||    .|.||   |:.|.:|...:....:.|..:|.     |...|.:..|:        
plant   771 KFARRY----GFLLL---ENIAAKDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTR 828

  Fly  1201 ----------RHVFLSEGIRQHLEHLRTEIRHKSATLMQATWRGWWWRKK 1240
                      :..|.....|..|:.|:|.|     |::|:..||...||:
plant   829 NRTLHGILRLQSYFRGHQARCRLKELKTGI-----TILQSFVRGEKMRKE 873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dNP_001188730.1 MYSc 476..1217 CDD:214580 230/777 (30%)
MYSc_Myo20 488..1206 CDD:276847 222/754 (29%)
VIIIANP_175453.2 MYSc_Myo8 171..817 CDD:276834 220/727 (30%)
MAD 848..>1029 CDD:368498 11/31 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0160
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D311886at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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