DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment d and MYA1

DIOPT Version :9

Sequence 1:NP_001188730.1 Gene:d / 34179 FlyBaseID:FBgn0262029 Length:1426 Species:Drosophila melanogaster
Sequence 2:NP_173201.2 Gene:MYA1 / 838333 AraportID:AT1G17580 Length:1520 Species:Arabidopsis thaliana


Alignment Length:890 Identity:237/890 - (26%)
Similarity:376/890 - (42%) Gaps:170/890 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   472 PKD-------MQDLIHLSGPLTEHAVMRTLQARFNERRYFTNVGPILLSINPYLDVGNPLTLTST 529
            |||       :.|:..|| .|.|..|:|.|:.|:.....:|..|.||:::||:..:.:   :..|
plant    51 PKDTEAPSGGVDDMTKLS-YLHEPGVLRNLETRYELNEIYTYTGNILIAVNPFQRLPH---IYET 111

  Fly   530 RAM---------PLAPQLQKIVQEAVRQQSETGYPQAIILSGTSGAGKTANAMLMLRQLFAIAG- 584
            ..|         .|:|.:..|...|.|.....|...:|::||.||||||....:::|.|..:.| 
plant   112 DMMEQYKGIALGELSPHVFAIGDAAYRAMINEGKNNSILVSGESGAGKTETTKMLMRYLAFLGGR 176

  Fly   585 -GGPETDAFKHLAAAFTVLRSLGSAKTTTNSESSRIGQFIEVQV-TDGALYRTKIHCYFLDQTRV 647
             |.......:.:..:..||.:.|:|||..|:.|||.|:|:|:|. .:|.:....|..|.|:::||
plant   177 SGVEGRTVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRV 241

  Fly   648 IRPLPKEKNYHIFYQLLAGLSREERQKLHLDGYSPANLRYLRGDIGQNEQ--------EDAARFQ 704
            .:....|:|||.|| ||.....|:.:|..|:  :|....||      |:.        :||:.:.
plant   242 CQISDPERNYHCFY-LLCAAPPEDIKKYKLE--NPHKFHYL------NQSSCYKLDGVDDASEYL 297

  Fly   705 AWKTCLGILGIPFLD---VVRVLAAVLLLGNVQFIDGGGLEVD---VK---GETELNSVASLLGV 760
            ..:..:.::||...:   :.||:||:|.|||:.|  |.|.|:|   :|   ..:.||..|.||..
plant   298 ETRRAMDVVGISNEEQEAIFRVVAAILHLGNIDF--GKGEEIDSSVIKDKDSRSHLNMAAELLMC 360

  Fly   761 PPAALFRGLTTRTHNVRGQLVKSVCGDGDANMTRDCLAKALYCRTVATIVRRANSLKRLGSTLGT 825
            ...:|...|..|......:::.......:|..:||.|||.:|......||.:.|           
plant   361 NAQSLEDALIRRVMVTPEEIITRTLDPDNAIASRDTLAKTIYSHLFDWIVNKIN----------- 414

  Fly   826 LSSDSNESVHNQADVASQHASTIGGGNAGSKSMAALNNAVRHATSDGFIGILDMFGFEEPSPHAH 890
                                 |..|.:..|||:               ||:||::|||....:: 
plant   415 ---------------------TSIGQDPRSKSI---------------IGVLDIYGFESFKCNS- 442

  Fly   891 LEHLCINLCAETMQHFYNTHIFKSSVESCRDEGIVCDTEVDYVDNVPCIDLISSLRTGLLSMLDA 955
            .|..|||...|.:|..:|.|:||...|....|.|.. :.::::||...::||.....|::|:||.
plant   443 FEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIAW-SYIEFIDNQDVLELIEKKPGGIISLLDE 506

  Fly   956 ECSV-RGTAESYVTKLKVQHRSSTRLETKPTAEPHDPRMFLIRHFAGRVEYDTTDFLDTNRDVVP 1019
            .|.. :.|.|::..||....:...|. .||.....|   |.|.|:||.|.|.:..|:|.|:|.:.
plant   507 ACMFPKSTHETFSQKLFQTFKEHERF-AKPKLSRTD---FTISHYAGEVTYQSNHFIDKNKDYIV 567

  Fly  1020 DDLVGVFYKHTCNFGFATHLFGSELKALYAQQQAPRGLSFRISPTSHSDLLNGDEPVSTLTQDFH 1084
            .:...:|....|.  |...||    .||:  :.:.|...|                 |::...|.
plant   568 AEHQALFTASNCK--FVAGLF----HALH--EDSSRSSKF-----------------SSIGSRFK 607

  Fly  1085 TRLDNLLRTLVHARPHFVRCIRSNGTEAARSFDRATVVRQIRSLQVLETVNLMASGFPHRMRFKQ 1149
            .:|.:|:.:|....||::|||:.|.......|:...|:.|:|...|||.:.:..:|:|.|:.|..
plant   608 QQLHSLMESLNGTEPHYIRCIKPNNVLKPGIFENFNVIHQLRCGGVLEAIRISCAGYPTRLAFYD 672

  Fly  1150 FNARYRMLAPFRLLRRSEDKALEDCQLILKYAMEQPPVLDGSVTLAWAPGKRHVFLSEGIRQHLE 1214
            |..|:.:|||..|....:||..  ||:||    ::..:.|..:      ||..:||..|....|:
plant   673 FLDRFGLLAPEVLEGNYDDKVA--CQMIL----DKKSLTDYQI------GKTKIFLRAGQMAELD 725

  Fly  1215 HLRTEIRHKSATLMQATWRGWWWRKKMGNGGAKRSKIPGLQQAPLPNNKTTPNSAAQNKAASSTM 1279
            ..|.|:...:|.::|..:|....||..      ||         :.|......|..:.:.|.:..
plant   726 ARRAEVLGNAARVIQRQFRTCMARKNY------RS---------IRNAAIVLQSFLRGEIARAVH 775

  Fly  1280 AALAAVAAAAPIS------VPRLSAKTT-------SLGIGGTVAR 1311
            ..|...|||..:.      |.|.|..||       ..|:...:||
plant   776 KKLRIEAAALRVQKNFRRYVDRKSFVTTRSSTIVLQTGLRAMIAR 820

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dNP_001188730.1 MYSc 476..1217 CDD:214580 210/770 (27%)
MYSc_Myo20 488..1206 CDD:276847 202/747 (27%)
MYA1NP_173201.2 Myosin_N 9..47 CDD:397036
MYSc_Myo11 73..717 CDD:276835 202/747 (27%)
IQ 850..872 CDD:197470
Smc <867..>1114 CDD:224117
MyosinXI_CBD 1099..1486 CDD:271259
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0160
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D311886at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.