DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment d and XI-I

DIOPT Version :9

Sequence 1:	NP_001188730.1	Gene:	d / 34179	FlyBaseID:	FBgn0262029	Length:	1426	Species:	Drosophila melanogaster
Sequence 2:	NP_001328260.1	Gene:	XI-I / 829456	AraportID:	AT4G33200	Length:	1523	Species:	Arabidopsis thaliana

Alignment Length:	845	Identity:	230/845 - (27%)
Similarity:	369/845 - (43%)	Gaps:	136/845 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly   457 SQQKM--QQQQQQGNSSPKDMQDLIHLSGPLTEHAVMRTLQARFNERRYFTNVGPILLSINPYLD 519
            |.:|:  :....:.::...||..|.:|.    |..|:..||.|:.....:|..|.||:::||:..
plant    52 SPEKLFRRDPDDEEHNGVDDMTKLTYLH----EAGVLYNLQRRYALNDIYTYTGSILIAVNPFKK 112

  Fly   520 VG---NPLTLTSTRAMP---LAPQLQKIVQEAVRQQSETGYPQAIILSGTSGAGKTANAMLMLRQ 578
            :.   |...:......|   |:|.:..:...|.|...:....|:|::||.||||||....|:::.
plant   113 LPHLYNGHMMEQYMGAPFGELSPHVFAVSDVAYRAMIDDSRSQSILVSGESGAGKTETTKLIMQY 177

  Fly   579 LFAIAGGGPETD--AFKHLAAAFTVLRSLGSAKTTTNSESSRIGQFIEVQV-TDGALYRTKIHCY 640
            |..:.|...:.|  ..:.:..:..:|.:.|:|||..|..|||.|:|:|:|. |:|.:....|..|
plant   178 LTFVGGRATDDDRSVEQQVLESNPLLEAFGNAKTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTY 242

  Fly   641 FLDQTRVIRPLPKEKNYHIFYQLLAGLSREERQKLHLDGYSPANLRYLRGDIGQNEQE------- 698
            .|:::||:|....|:|||.||||.|..:..|:.||.    :|....||      |:.:
plant   243 LLERSRVVRITDPERNYHCFYQLCASGNDAEKYKLS----NPRQFHYL------NQSKTYELEGV 297

  Fly   699 -DAARFQAWKTCLGILGIPFLD---VVRVLAAVLLLGNVQFIDG----GGLEVDVKGETELNSVA 755
             .|..::..:..:.|:||...:   :.|.|||:|.||||:|..|    ..:..|.:....|...|
plant   298 SSAEEYKNTRRAMDIVGISQDEQEGIFRTLAAILHLGNVEFSSGREHDSSVVKDPESRHHLQMAA 362

  Fly   756 SLLGVPPAALFRGLTTRTHNVR-GQLVKSVCGDGDANMT-RDCLAKALYCRTVATIVRRANSLKR 818
            .|.......|...|.||:...| |.::|::  |.:|.:| ||.|||.:|......:|.:.
plant   363 DLFKCDANLLLASLCTRSILTREGIIIKAL--DPNAAVTSRDTLAKTVYAHLFDWLVDKI----- 420

  Fly   819 LGSTLGTLSSDSNESVHNQADVASQHASTIGGGNAGSKSMAALNNAVRHATSDGFIGILDMFGFE 883
                        |:||....:...|                              ||:||::||
plant   421 ------------NKSVGQDPESRFQ------------------------------IGVLDIYGF- 442

  Fly   884 EPSPHAHLEHLCINLCAETMQHFYNTHIFKSSVESCRDEGIVCDTEVDYVDNVPCIDLISSLRTG 948
            |...:...|..|||...|.:|..:|.|:||...:..|.|.|.. :.::::||...:|||.....|
plant   443 ECFKNNSFEQFCINFANEKLQQHFNEHVFKMEQDEYRKEEINW-SYIEFIDNQDVLDLIEKKPIG 506

  Fly   949 LLSMLDAECSV-RGTAESYVTKLKVQHRSSTRLETKPTAEPHDPRMFLIRHFAGRVEYDTTDFLD 1012
            ::::||..|.. |.|.||:..||....|...||| ||.....|   |.:.|:||:|.|.|..|||
plant   507 VIALLDEACMFPRSTHESFSMKLFQNFRFHPRLE-KPKFSETD---FTLSHYAGKVTYQTEAFLD 567

  Fly  1013 TNRDVVPDDLVGVFYKHTCNFGFATHLFGSELKALYAQQQAPRGLSFRISPTSHSDLLNGDEPVS 1077
            .|||.       ...:| ||              |.:..:.|  ....|.|::..:........|
plant   568 KNRDY-------TIVEH-CN--------------LLSSSKCP--FVAGIFPSAPEESTRSSYKFS 608

  Fly  1078 TLTQDFHTRLDNLLRTLVHARPHFVRCIRSNGTEAARSFDRATVVRQIRSLQVLETVNLMASGFP 1142
            :::..|..:|..|:.||....||:|||::.|.....:.|:..:|:.|:|...|||.|.:..:|:|
plant   609 SVSSRFKQQLQALMETLSKTEPHYVRCVKPNSLNRPQKFESLSVLHQLRCGGVLEAVRISLAGYP 673

  Fly  1143 HRMRFKQFNARYRMLAPFRLLRRSEDKALEDCQLILKYAMEQPPVLDGSVTLAWAPGKRHVFLSE 1207
            .|..:..|..|:.:|||..:...::::||.: :::.|..:       |:..|    |:..|||..
plant   674 TRRNYSDFVDRFGLLAPEFMDESNDEQALTE-KILSKLGL-------GNYQL----GRTKVFLRA 726

  Fly  1208 GIRQHLEHLRTEIRHKSATLMQATWRGWWWRKKMGNGGAKRSKIPGLQQAPLPNN--KTTPNSAA 1270
            |....|:..|.|:...||.|:|...|.:...:...:..|....|....:..|..|  .|..|:||
plant   727 GQIGILDSRRAEVLDASARLIQRRLRTFVTHQNFISARASAISIQAYCRGCLSRNAYATRRNAAA 791

Fly 1271 1270
plant 792 791

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
d	NP_001188730.1	MYSc	476..1217	CDD:214580	211/767 (28%)
d	NP_001188730.1	MYSc_Myo20	488..1206	CDD:276847	205/744 (28%)
XI-I	NP_001328260.1	None

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0160
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D311886at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820