DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dachs and XI-I

DIOPT Version :10

Sequence 1:NP_001188730.1 Gene:dachs / 34179 FlyBaseID:FBgn0262029 Length:1426 Species:Drosophila melanogaster
Sequence 2:NP_001328260.1 Gene:XI-I / 829456 AraportID:AT4G33200 Length:1523 Species:Arabidopsis thaliana


Alignment Length:845 Identity:230/845 - (27%)
Similarity:369/845 - (43%) Gaps:136/845 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   457 SQQKM--QQQQQQGNSSPKDMQDLIHLSGPLTEHAVMRTLQARFNERRYFTNVGPILLSINPYLD 519
            |.:|:  :....:.::...||..|.:|.    |..|:..||.|:.....:|..|.||:::||:..
plant    52 SPEKLFRRDPDDEEHNGVDDMTKLTYLH----EAGVLYNLQRRYALNDIYTYTGSILIAVNPFKK 112

  Fly   520 VG---NPLTLTSTRAMP---LAPQLQKIVQEAVRQQSETGYPQAIILSGTSGAGKTANAMLMLRQ 578
            :.   |...:......|   |:|.:..:...|.|...:....|:|::||.||||||....|:::.
plant   113 LPHLYNGHMMEQYMGAPFGELSPHVFAVSDVAYRAMIDDSRSQSILVSGESGAGKTETTKLIMQY 177

  Fly   579 LFAIAGGGPETD--AFKHLAAAFTVLRSLGSAKTTTNSESSRIGQFIEVQV-TDGALYRTKIHCY 640
            |..:.|...:.|  ..:.:..:..:|.:.|:|||..|..|||.|:|:|:|. |:|.:....|..|
plant   178 LTFVGGRATDDDRSVEQQVLESNPLLEAFGNAKTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTY 242

  Fly   641 FLDQTRVIRPLPKEKNYHIFYQLLAGLSREERQKLHLDGYSPANLRYLRGDIGQNEQE------- 698
            .|:::||:|....|:|||.||||.|..:..|:.||.    :|....||      |:.:       
plant   243 LLERSRVVRITDPERNYHCFYQLCASGNDAEKYKLS----NPRQFHYL------NQSKTYELEGV 297

  Fly   699 -DAARFQAWKTCLGILGIPFLD---VVRVLAAVLLLGNVQFIDG----GGLEVDVKGETELNSVA 755
             .|..::..:..:.|:||...:   :.|.|||:|.||||:|..|    ..:..|.:....|...|
plant   298 SSAEEYKNTRRAMDIVGISQDEQEGIFRTLAAILHLGNVEFSSGREHDSSVVKDPESRHHLQMAA 362

  Fly   756 SLLGVPPAALFRGLTTRTHNVR-GQLVKSVCGDGDANMT-RDCLAKALYCRTVATIVRRANSLKR 818
            .|.......|...|.||:...| |.::|::  |.:|.:| ||.|||.:|......:|.:.     
plant   363 DLFKCDANLLLASLCTRSILTREGIIIKAL--DPNAAVTSRDTLAKTVYAHLFDWLVDKI----- 420

  Fly   819 LGSTLGTLSSDSNESVHNQADVASQHASTIGGGNAGSKSMAALNNAVRHATSDGFIGILDMFGFE 883
                        |:||....:...|                              ||:||::|| 
plant   421 ------------NKSVGQDPESRFQ------------------------------IGVLDIYGF- 442

  Fly   884 EPSPHAHLEHLCINLCAETMQHFYNTHIFKSSVESCRDEGIVCDTEVDYVDNVPCIDLISSLRTG 948
            |...:...|..|||...|.:|..:|.|:||...:..|.|.|.. :.::::||...:|||.....|
plant   443 ECFKNNSFEQFCINFANEKLQQHFNEHVFKMEQDEYRKEEINW-SYIEFIDNQDVLDLIEKKPIG 506

  Fly   949 LLSMLDAECSV-RGTAESYVTKLKVQHRSSTRLETKPTAEPHDPRMFLIRHFAGRVEYDTTDFLD 1012
            ::::||..|.. |.|.||:..||....|...||| ||.....|   |.:.|:||:|.|.|..|||
plant   507 VIALLDEACMFPRSTHESFSMKLFQNFRFHPRLE-KPKFSETD---FTLSHYAGKVTYQTEAFLD 567

  Fly  1013 TNRDVVPDDLVGVFYKHTCNFGFATHLFGSELKALYAQQQAPRGLSFRISPTSHSDLLNGDEPVS 1077
            .|||.       ...:| ||              |.:..:.|  ....|.|::..:........|
plant   568 KNRDY-------TIVEH-CN--------------LLSSSKCP--FVAGIFPSAPEESTRSSYKFS 608

  Fly  1078 TLTQDFHTRLDNLLRTLVHARPHFVRCIRSNGTEAARSFDRATVVRQIRSLQVLETVNLMASGFP 1142
            :::..|..:|..|:.||....||:|||::.|.....:.|:..:|:.|:|...|||.|.:..:|:|
plant   609 SVSSRFKQQLQALMETLSKTEPHYVRCVKPNSLNRPQKFESLSVLHQLRCGGVLEAVRISLAGYP 673

  Fly  1143 HRMRFKQFNARYRMLAPFRLLRRSEDKALEDCQLILKYAMEQPPVLDGSVTLAWAPGKRHVFLSE 1207
            .|..:..|..|:.:|||..:...::::||.: :::.|..:       |:..|    |:..|||..
plant   674 TRRNYSDFVDRFGLLAPEFMDESNDEQALTE-KILSKLGL-------GNYQL----GRTKVFLRA 726

  Fly  1208 GIRQHLEHLRTEIRHKSATLMQATWRGWWWRKKMGNGGAKRSKIPGLQQAPLPNN--KTTPNSAA 1270
            |....|:..|.|:...||.|:|...|.:...:...:..|....|....:..|..|  .|..|:||
plant   727 GQIGILDSRRAEVLDASARLIQRRLRTFVTHQNFISARASAISIQAYCRGCLSRNAYATRRNAAA 791

  Fly  1271  1270
            plant   792  791

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dachsNP_001188730.1 MYSc_Myo20 488..1206 CDD:276847 205/744 (28%)
IQCD 1219..1250 CDD:467745 7/30 (23%)
XI-INP_001328260.1 Myosin_N 17..56 CDD:460670 1/3 (33%)
MYSc_Myo11 81..725 CDD:276835 205/744 (28%)
CCDC158 <751..>1056 CDD:464943 9/41 (22%)
Tropomyosin_1 891..1041 CDD:403808
MyosinXI_CBD 1116..1480 CDD:271259
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.